list-of-software
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list-of-software [2023/02/20 18:33] – aorth | list-of-software [2023/04/20 21:22] – aorth | ||
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|[[arb-software|arb]]|6.0.3|'' | |[[arb-software|arb]]|6.0.3|'' | ||
|[[artemis-software|artemis]]|16.0.0|'' | |[[artemis-software|artemis]]|16.0.0|'' | ||
+ | |[[artic-software|artic]]|1.2.3|'' | ||
|[[artic-tools-software|artic-tools]]|0.3.1|'' | |[[artic-tools-software|artic-tools]]|0.3.1|'' | ||
|[[augustus-software|augustus]]|3.3|'' | |[[augustus-software|augustus]]|3.3|'' | ||
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|[[fraggenescan-software|FragGeneScan ]]|1.30|'' | |[[fraggenescan-software|FragGeneScan ]]|1.30|'' | ||
|[[freebayes-software|freebayes]]|1.3.4|'' | |[[freebayes-software|freebayes]]|1.3.4|'' | ||
- | |[[funannotate-software|funannotate]]|1.8.11|See software page| | | + | |[[funannotate-software|funannotate]]|1.8.15|See software page| | |
|[[gassflow-software|GassFlow ]]|1.0|'' | |[[gassflow-software|GassFlow ]]|1.0|'' | ||
|[[gatk-software|gatk]]|4.3.0.0|'' | |[[gatk-software|gatk]]|4.3.0.0|'' | ||
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|[[htslib-software|htslib]]|1.15.1|'' | |[[htslib-software|htslib]]|1.15.1|'' | ||
|[[hypo-software|hypo]]|1.0.3|'' | |[[hypo-software|hypo]]|1.0.3|'' | ||
+ | |[[hyphy-software|hyphy]]|2.5.48|'' | ||
|[[idba-software|idba]]|1.1.2|'' | |[[idba-software|idba]]|1.1.2|'' | ||
|[[igblast-software|igblast]]|1.10.0|'' | |[[igblast-software|igblast]]|1.10.0|'' | ||
Line 223: | Line 225: | ||
|[[muscle-software|muscle]]|3.8.1551|'' | |[[muscle-software|muscle]]|3.8.1551|'' | ||
|[[mummer-software|mummer]]|4.0.0rc1|'' | |[[mummer-software|mummer]]|4.0.0rc1|'' | ||
- | |[[nanopolish-software|nanopolish]]|0.10.2|'' | + | |[[nanopolish-software|nanopolish]]|0.14.0|'' |
|[[netmhcpan-software|netmhcpan]]|2.8|'' | |[[netmhcpan-software|netmhcpan]]|2.8|'' | ||
|[[nextalign-software|nextalign]]|1.11.0|'' | |[[nextalign-software|nextalign]]|1.11.0|'' | ||
- | |[[nextclade-software|nextclade]]|1.11.0|'' | + | |[[nextclade-software|nextclade]]|2.11.0|'' |
|[[nextclip-software|nextclip]]|1.3.1|'' | |[[nextclip-software|nextclip]]|1.3.1|'' | ||
- | |[[nextflow-software|nextflow]]|21.10 (21.10.6)|'' | + | |[[nextflow-software|nextflow]]|22.10 (22.10.7)|'' |
|[[ngs-tools-software|ngs-tools]]|3.0.0|'' | |[[ngs-tools-software|ngs-tools]]|3.0.0|'' | ||
|[[ntcard-software|ntCard]]|1.0.0|'' | |[[ntcard-software|ntCard]]|1.0.0|'' | ||
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|[[polyphen-software|polyphen]]|2.2.2|'' | |[[polyphen-software|polyphen]]|2.2.2|'' | ||
|[[poplddecay-software|poplddecay]]|3.41|'' | |[[poplddecay-software|poplddecay]]|3.41|'' | ||
- | |[[porechop-software|porechop]]|0.2.4|'' | + | |[[porechop-software|porechop]]|0.3.2pre|'' |
|[[pplacer-software|pplacer]]|1.1.alpha19|'' | |[[pplacer-software|pplacer]]|1.1.alpha19|'' | ||
|[[prank-software|prank]]|170427|'' | |[[prank-software|prank]]|170427|'' |
list-of-software.txt · Last modified: 2024/06/19 11:50 by aorth