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list-of-software

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list-of-software [2022/07/07 11:28] – aorthlist-of-software [2022/09/20 07:39] – aorth
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 |[[gtdbtk-software|gtdbtk]]|1.1.1|''module load gtdbtk/1.1.1''| | |[[gtdbtk-software|gtdbtk]]|1.1.1|''module load gtdbtk/1.1.1''| |
 |[[guidance-software|guidance]]|2.02|''module load guidance/2.02''| | |[[guidance-software|guidance]]|2.02|''module load guidance/2.02''| |
-|[[guppy-software|guppy]]|6.0.1|''module load guppy/6.0.1''| |+|[[guppy-software|guppy]]|6.2.1|''module load guppy/6.2.1''| |
 |[[halcyon-software|halcyon]]|0.1.1|''module load halcyon/0.1.1''| | |[[halcyon-software|halcyon]]|0.1.1|''module load halcyon/0.1.1''| |
 |[[hapflk-software|hapflk]]|1.4|''module load hapflk/1.4''| | |[[hapflk-software|hapflk]]|1.4|''module load hapflk/1.4''| |
Line 202: Line 202:
 |[[migmap-software|migmap]]|1.0.2|''module load migmap/1.0.2''| | |[[migmap-software|migmap]]|1.0.2|''module load migmap/1.0.2''| |
 |[[miniasm-software|miniasm]]|0.3|''module load miniasm/0.3''| | |[[miniasm-software|miniasm]]|0.3|''module load miniasm/0.3''| |
 +|[[minimac3-software|minimac3]]|2.0.1|''module load minimac3/2.0.1''| |
 |[[minimac4-software|minimac4]]|1.0.3|''module load minimac4/1.0.3''| | |[[minimac4-software|minimac4]]|1.0.3|''module load minimac4/1.0.3''| |
 |[[minimap2-software|minimap2]]|2.22|''module load minimap2/2.22''| | |[[minimap2-software|minimap2]]|2.22|''module load minimap2/2.22''| |
Line 271: Line 272:
 |[[provean-software|provean]]|1.1.5|''module load provean/1.1.5''| | |[[provean-software|provean]]|1.1.5|''module load provean/1.1.5''| |
 |[[purge-haplotigs-software|purge_haplotigs]]|1.1.1|''module load purge_haplotigs/1.1.1''| | |[[purge-haplotigs-software|purge_haplotigs]]|1.1.1|''module load purge_haplotigs/1.1.1''| |
-|[[python-software|python]]|3.8.11|''module load python/3.8''| |+|[[python-software|python]]|3.9.14|''module load python/3.9''| |
 |qdd|3_beta|''module load qdd/3_beta''| | |qdd|3_beta|''module load qdd/3_beta''| |
 |[[qiime-software|qiime]]|1.9.1|''module load qiime/1.9.1''| | |[[qiime-software|qiime]]|1.9.1|''module load qiime/1.9.1''| |
Line 328: Line 329:
 |[[soapdenovo-trans-software|SOAPdenovo-Trans]]|1.03|''module load SOAPdenovo-Trans/1.03''| | |[[soapdenovo-trans-software|SOAPdenovo-Trans]]|1.03|''module load SOAPdenovo-Trans/1.03''| |
 |[[solexaqa-software|SolexaQA++]]|3.1.3|''module load SolexaQA++/3.1.3''| | |[[solexaqa-software|SolexaQA++]]|3.1.3|''module load SolexaQA++/3.1.3''| |
-|[[spades-software|spades]]|3.15 (3.15.4)|''module load spades/3.15''| |+|[[spades-software|spades]]|3.15 (3.15.5)|''module load spades/3.15''| |
 |[[sourmash-software|sourmash]]|1.0|''module load sourmash/1.0''| | |[[sourmash-software|sourmash]]|1.0|''module load sourmash/1.0''| |
 |[[speedseq-software|speedseq]]|0.1.2|''module load speedseq/0.1.2''| | |[[speedseq-software|speedseq]]|0.1.2|''module load speedseq/0.1.2''| |
list-of-software.txt · Last modified: 2024/06/19 11:50 by aorth