User Tools

Site Tools


list-of-software

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision
Previous revision
Next revisionBoth sides next revision
list-of-software [2022/04/25 15:14] aorthlist-of-software [2023/02/20 12:59] aorth
Line 23: Line 23:
 |[[arb-software|arb]]|6.0.3|''module load arb/6.0.3''| | |[[arb-software|arb]]|6.0.3|''module load arb/6.0.3''| |
 |[[artemis-software|artemis]]|16.0.0|''module load act/16.0.0''| | |[[artemis-software|artemis]]|16.0.0|''module load act/16.0.0''| |
 +|[[artic-tools-software|artic-tools]]|0.3.1|''module load artic-tools/0.3.1''| |
 |[[augustus-software|augustus]]|3.3|''module load augustus/3.3''| | |[[augustus-software|augustus]]|3.3|''module load augustus/3.3''| |
 |[[awscli-software|awscli]]|2.4.0|''module load awscli/2''| | |[[awscli-software|awscli]]|2.4.0|''module load awscli/2''| |
Line 30: Line 31:
 |bayescan|2.1|''module load bayescan/2.1''| | |bayescan|2.1|''module load bayescan/2.1''| |
 |[[bbmap-software|bbmap]]|38.95|''module load bbmap/38.95''| | |[[bbmap-software|bbmap]]|38.95|''module load bbmap/38.95''| |
-|[[bcftools-software|bcftools]]|1.13|''module load bcftools/1.13''| |+|[[bcftools-software|bcftools]]|1.15.1|''module load bcftools/1.15.1''| |
 |bcl2fastq|2.20.0.422|''bcl2fastq''| | |bcl2fastq|2.20.0.422|''bcl2fastq''| |
 |[[beagle-software|beagle]]|3.1.2|''module load beagle/3.1.2''| | |[[beagle-software|beagle]]|3.1.2|''module load beagle/3.1.2''| |
Line 43: Line 44:
 |[[blast-software|blast]]|2.12.0+|''module load blast/2.12.0+''| | |[[blast-software|blast]]|2.12.0+|''module load blast/2.12.0+''| |
 |[[blobtools-software|blobtools]]|0.9.19.3|''module load blobtools/0.9.19.3''| | |[[blobtools-software|blobtools]]|0.9.19.3|''module load blobtools/0.9.19.3''| |
-|blat|06-Aug-2013|''module load blat/06-Aug-2013''| |+|[[blat-software|blat]]|37x1|''module load blat/37x1''| |
 |[[bmtagger-software|bmtagger]]|0.3.102.4|''module load bmtagger/0.3.102.4''| | |[[bmtagger-software|bmtagger]]|0.3.102.4|''module load bmtagger/0.3.102.4''| |
-|[[bowtie-software|bowtie1 ]]|1.2.3|''module load bowtie/1.2.3''| | +|[[bowtie-software|bowtie1]]|1.2.3|''module load bowtie/1.2.3''| | 
-|[[bowtie2-software|bowtie2 ]]|2.3.4.1|''module load bowtie2/2.3.4.1''| |+|[[bowtie2-software|bowtie2]]|2.5.0|''module load bowtie2/2.5.0''| |
 |[[brig-software|brig]]|0.95|''module load brig/0.95''| | |[[brig-software|brig]]|0.95|''module load brig/0.95''| |
 |[[busco-software|BUSCO ]]|5.2.2|''module load BUSCO/5.2.2''| | |[[busco-software|BUSCO ]]|5.2.2|''module load BUSCO/5.2.2''| |
Line 80: Line 81:
 |[[drep-software|drep]]|2.5.4|''module load drep/2.5.4''| | |[[drep-software|drep]]|2.5.4|''module load drep/2.5.4''| |
 |[[ea-utils-software|ea-utils]]|1.04.807|''module load ea-utils/1.04.807''| | |[[ea-utils-software|ea-utils]]|1.04.807|''module load ea-utils/1.04.807''| |
 +|[[eagle-software|eagle]]|2.4.1|''module load eagle/2.4.1''| |
 |[[edirect-software|edirect]]| 7.80 | ''module load edirect/7.80'' | | |[[edirect-software|edirect]]| 7.80 | ''module load edirect/7.80'' | |
 +|[[eggnog-mapper-software|eggnog-mapper]]| 2.1.9 | ''module load eggnog-mapper/2.1.9'' | |
 |eigenstrat|3.0|''module load eigenstrat/3.0''| | |eigenstrat|3.0|''module load eigenstrat/3.0''| |
 +|[[emblmygff3-software|emblmygff3]]|2.1|''module load emblmygff3/2.1''| |
 |[[emboss-software|emboss]]|6.6.0|''module load emboss/6.6.0''| | |[[emboss-software|emboss]]|6.6.0|''module load emboss/6.6.0''| |
 |[[easer-software|easer]]|1.7.0|''module load easer/1.7.0''| | |[[easer-software|easer]]|1.7.0|''module load easer/1.7.0''| |
Line 106: Line 110:
 |[[fraggenescan-software|FragGeneScan ]]|1.30|''module load fraggenescan/1.30''| | |[[fraggenescan-software|FragGeneScan ]]|1.30|''module load fraggenescan/1.30''| |
 |[[freebayes-software|freebayes]]|1.3.4|''module load freebayes/1.3.4''| | |[[freebayes-software|freebayes]]|1.3.4|''module load freebayes/1.3.4''| |
-|[[funannotate-software|funannotate]]|1.8.9|''module load funannotate/1.8.9''| |+|[[funannotate-software|funannotate]]|1.8.11|See software page| |
 |[[gassflow-software|GassFlow ]]|1.0|''module load gassflow/1.0''| | |[[gassflow-software|GassFlow ]]|1.0|''module load gassflow/1.0''| |
-|[[gatk-software|gatk]]|4.2.2.0|''module load gatk/4.2.2.0''| |+|[[gatk-software|gatk]]|4.3.0.0|''module load gatk/4.3.0.0''| |
 |[[gapfiller-software|gapfiller]]|1.10|''module load gapfiller/1.10''| | |[[gapfiller-software|gapfiller]]|1.10|''module load gapfiller/1.10''| |
 |[[geneid-software|geneid]]|1.4.4|''module load geneid/1.4.4''| | |[[geneid-software|geneid]]|1.4.4|''module load geneid/1.4.4''| |
Line 126: Line 130:
 |[[gtdbtk-software|gtdbtk]]|1.1.1|''module load gtdbtk/1.1.1''| | |[[gtdbtk-software|gtdbtk]]|1.1.1|''module load gtdbtk/1.1.1''| |
 |[[guidance-software|guidance]]|2.02|''module load guidance/2.02''| | |[[guidance-software|guidance]]|2.02|''module load guidance/2.02''| |
-|[[guppy-software|guppy]]|5.0.11|''module load guppy/5.0.11''| |+|[[guppy-software|guppy]]|6.2.1|''module load guppy/6.2.1''| |
 |[[halcyon-software|halcyon]]|0.1.1|''module load halcyon/0.1.1''| | |[[halcyon-software|halcyon]]|0.1.1|''module load halcyon/0.1.1''| |
 |[[hapflk-software|hapflk]]|1.4|''module load hapflk/1.4''| | |[[hapflk-software|hapflk]]|1.4|''module load hapflk/1.4''| |
Line 137: Line 141:
 |[[hpg-variant-software|hpg-variant]]|1.0|''module load hpg-variant/1.0''| | |[[hpg-variant-software|hpg-variant]]|1.0|''module load hpg-variant/1.0''| |
 |[[hic_qc-software|hic_qc]]|git-1e132fb2|''module load hic_qc/git-1e132fb2''| | |[[hic_qc-software|hic_qc]]|git-1e132fb2|''module load hic_qc/git-1e132fb2''| |
 +|[[hifiasm-software|hifiasm]]|0.16.1|''module load hifiasm/0.16.1''| |
 |[[hisat2-software|hisat2]]|2.1.0|''module load hisat2/2.1.0''| | |[[hisat2-software|hisat2]]|2.1.0|''module load hisat2/2.1.0''| |
 |[[htseq-software|htseq]]|0.9.1|''module load htseq/0.9.1''| | |[[htseq-software|htseq]]|0.9.1|''module load htseq/0.9.1''| |
-|[[htslib-software|htslib]]|1.13|''module load htslib/1.13''| |+|[[htslib-software|htslib]]|1.15.1|''module load htslib/1.15.1''| |
 |[[hypo-software|hypo]]|1.0.3|''module load hypo/1.0.3''| | |[[hypo-software|hypo]]|1.0.3|''module load hypo/1.0.3''| |
 |[[idba-software|idba]]|1.1.2|''module load idba/1.1.2''| | |[[idba-software|idba]]|1.1.2|''module load idba/1.1.2''| |
Line 146: Line 151:
 |[[igrec-software|igrec]]|3.0.0|''module load igrec/3.0.0''| | |[[igrec-software|igrec]]|3.0.0|''module load igrec/3.0.0''| |
 |[[igsimulator-software|igsimulator]]|git-c3778b74|''module load igsimulator/git-c3778b74''| | |[[igsimulator-software|igsimulator]]|git-c3778b74|''module load igsimulator/git-c3778b74''| |
-|[[iqtree-software|iqtree]]|1.6.12|''module load iqtree/1.6.12''| |+|[[iqtree-software|iqtree]]|2.2.0|''module load iqtree/2.2.0''| |
 |[[igv-software|igv]]|2.4.5|''module load igv/2.4.5''| | |[[igv-software|igv]]|2.4.5|''module load igv/2.4.5''| |
 |[[igvtools-software|igvtools]]|2.3.98|''module load igvtools/2.3.98''| | |[[igvtools-software|igvtools]]|2.3.98|''module load igvtools/2.3.98''| |
Line 161: Line 166:
 |[[karect-software|karect]]|1.0|''module load karect/1.0''| | |[[karect-software|karect]]|1.0|''module load karect/1.0''| |
 |[[kat-software|kat]]|2.3.4|''module load kat/2.3.4''| | |[[kat-software|kat]]|2.3.4|''module load kat/2.3.4''| |
-|[[kma-software|kma]]|1.4.0|''module load kma/1.4.0''| |+|[[kma-software|kma]]|1.4.11|''module load kma/1.4.11''| |
 |[[kmc-software|kmc]]|3.1.1|''module load kmc/3.1.1''| | |[[kmc-software|kmc]]|3.1.1|''module load kmc/3.1.1''| |
 |[[kmergenie-software|kmergenie]]|1.7038|''module load kmergenie/1.7038''| | |[[kmergenie-software|kmergenie]]|1.7038|''module load kmergenie/1.7038''| |
 |[[kmer-ssr-software|kmer-ssr]]|git-4043c0e7|''module load kmer-ssr/git-4043c0e7''| | |[[kmer-ssr-software|kmer-ssr]]|git-4043c0e7|''module load kmer-ssr/git-4043c0e7''| |
-|[[kraken-software|kraken]]|2.0.8-beta|''module load kraken/2.0.8-beta''| |+|[[kraken-software|kraken]]|2.1.2|''module load kraken/2.1.2''| |
 |[[krona-software|krona]]|2.8.1|''module load krona/2.8.1''| | |[[krona-software|krona]]|2.8.1|''module load krona/2.8.1''| |
 |lamp|2.5|''module load lamp/2.5''| | |lamp|2.5|''module load lamp/2.5''| |
Line 172: Line 177:
 |[[libsvm-software|libsvm]]|3.20|''module load libsvm/3.20''| | |[[libsvm-software|libsvm]]|3.20|''module load libsvm/3.20''| |
 |[[lighter-software|lighter]]|1.1.2|''module load lighter/1.1.2''| | |[[lighter-software|lighter]]|1.1.2|''module load lighter/1.1.2''| |
 +|[[longshot-software|longshot]]|0.4.5|''module load longshot/0.4.5''| |
 |[[lordec-software|lordec]]|0.9|''module load lordec/0.9''| | |[[lordec-software|lordec]]|0.9|''module load lordec/0.9''| |
 |[[ltr_retriever-software|ltr_retriever]]|2.9.0|''module load ltr_retriever/2.9.0''| | |[[ltr_retriever-software|ltr_retriever]]|2.9.0|''module load ltr_retriever/2.9.0''| |
Line 199: Line 205:
 |[[migmap-software|migmap]]|1.0.2|''module load migmap/1.0.2''| | |[[migmap-software|migmap]]|1.0.2|''module load migmap/1.0.2''| |
 |[[miniasm-software|miniasm]]|0.3|''module load miniasm/0.3''| | |[[miniasm-software|miniasm]]|0.3|''module load miniasm/0.3''| |
 +|[[minimac3-software|minimac3]]|2.0.1|''module load minimac3/2.0.1''| |
 +|[[minimac4-software|minimac4]]|1.0.3|''module load minimac4/1.0.3''| |
 |[[minimap2-software|minimap2]]|2.22|''module load minimap2/2.22''| | |[[minimap2-software|minimap2]]|2.22|''module load minimap2/2.22''| |
 |[[minpath-software|MinPath]]|1.0.2|''module load MinPath/1.2''| | |[[minpath-software|MinPath]]|1.0.2|''module load MinPath/1.2''| |
Line 226: Line 234:
 |[[ngsqctoolkit-software|ngsqctoolkit]]|2.3.3|''module load ngsqctoolkit/2.3.3''| | |[[ngsqctoolkit-software|ngsqctoolkit]]|2.3.3|''module load ngsqctoolkit/2.3.3''| |
 |[[nQuire-software|nQuire]]|git-a990a88e|''module load nQuire/git-a990a88e''| | |[[nQuire-software|nQuire]]|git-a990a88e|''module load nQuire/git-a990a88e''| |
-|[[nvtop-software|nvtop]]|1.2.2|''module load nvtop/1.2.2''| |+|[[nvtop-software|nvtop]]|2.0.2|''module load nvtop/2.0.2''| |
 |novacraft|3.02.07|''module load novacraft/3.02.07''| | |novacraft|3.02.07|''module load novacraft/3.02.07''| |
 |[[oases-software|oases]]|0.2.08|''module load oases/0.2.08''| | |[[oases-software|oases]]|0.2.08|''module load oases/0.2.08''| |
 |[[ocaml-software#v4.02.1|ocaml]]|4.02.1|''module load ocaml/4.02.1''| | |[[ocaml-software#v4.02.1|ocaml]]|4.02.1|''module load ocaml/4.02.1''| |
 +|[[oligoarrayaux-software|oligoarrayaux]]|3.8.1|''module load oligoarrayaux/3.8.1''| |
 |[[opam-software#v1.2.0|opam]]|1.2.0|''module load opam/1.2.0''| | |[[opam-software#v1.2.0|opam]]|1.2.0|''module load opam/1.2.0''| |
 |orthomcl|2.0.3|''module load orthomcl/2.0.3''| | |orthomcl|2.0.3|''module load orthomcl/2.0.3''| |
Line 248: Line 257:
 |[[phylip-software|phylip]]|3.696|''module load phylip/3.696''| | |[[phylip-software|phylip]]|3.696|''module load phylip/3.696''| |
 |[[phyml-software|phyml]]|3.3.20180621|''module load phyml/3.3.20180621''| | |[[phyml-software|phyml]]|3.3.20180621|''module load phyml/3.3.20180621''| |
-|[[picard-software|picard]]|2.26.1|''module load picard/2.26.1''| |+|[[picard-software|picard]]|2.27.5|''module load picard/2.27.5''| |
 |[[picrust-software#v1.0.0|picrust]]|1.0.0|''module load picrust/1.0.0''| | |[[picrust-software#v1.0.0|picrust]]|1.0.0|''module load picrust/1.0.0''| |
 |[[pilon-software|pilon]]|1.23|''module load pilon/1.23''| | |[[pilon-software|pilon]]|1.23|''module load pilon/1.23''| |
Line 260: Line 269:
 |[[prank-software|prank]]|170427|''module load prank/170427''| | |[[prank-software|prank]]|170427|''module load prank/170427''| |
 |[[presto-software|presto]]|0.5.13|''module load presto/0.5.13''| | |[[presto-software|presto]]|0.5.13|''module load presto/0.5.13''| |
 +|[[primalscheme-software|primalscheme]]|1.3.2|''module load primalscheme/1.3.2''| |
 |primer3|2.3.6|''module load primer3/2.3.6''| | |primer3|2.3.6|''module load primer3/2.3.6''| |
 |[[prinseq-software|prinseq]]|0.20.4|''module load prinseq/0.20.4''| | |[[prinseq-software|prinseq]]|0.20.4|''module load prinseq/0.20.4''| |
Line 266: Line 276:
 |[[provean-software|provean]]|1.1.5|''module load provean/1.1.5''| | |[[provean-software|provean]]|1.1.5|''module load provean/1.1.5''| |
 |[[purge-haplotigs-software|purge_haplotigs]]|1.1.1|''module load purge_haplotigs/1.1.1''| | |[[purge-haplotigs-software|purge_haplotigs]]|1.1.1|''module load purge_haplotigs/1.1.1''| |
-|[[python-software|python]]|3.8.11|''module load python/3.8''| |+|[[python-software|python]]|3.9.14|''module load python/3.9''| |
 |qdd|3_beta|''module load qdd/3_beta''| | |qdd|3_beta|''module load qdd/3_beta''| |
 |[[qiime-software|qiime]]|1.9.1|''module load qiime/1.9.1''| | |[[qiime-software|qiime]]|1.9.1|''module load qiime/1.9.1''| |
Line 273: Line 283:
 |[[quickmerge-software|quickmerge]]|0.3|''module load quickmerge/0.3''| | |[[quickmerge-software|quickmerge]]|0.3|''module load quickmerge/0.3''| |
 |[[quorum-software|Quorum]]|1.1.1|''module load quorum/1.1.1''| | |[[quorum-software|Quorum]]|1.1.1|''module load quorum/1.1.1''| |
-|[[r-software|R]]|4.0.5|''module load R/4.0''| |+|[[r-software|R]]|4.2.0|''module load R/4.2''| |
 |[[racon-software|racon]]|1.3.1|''module load racon/1.3.1''| | |[[racon-software|racon]]|1.3.1|''module load racon/1.3.1''| |
-|[[rmblast-software|rmblast]]|2.11.0|''module load rmblast/2.11.0''| | 
 |[[rapsearch-software|rapsearch]]|2.22|''module load rapsearch/2.22''| | |[[rapsearch-software|rapsearch]]|2.22|''module load rapsearch/2.22''| |
 |[[ratt-software|RATT]]|r18|''module load ratt/r18''| | |[[ratt-software|RATT]]|r18|''module load ratt/r18''| |
 |[[raxml-software|RAxML]]|8.2.12|''module load RAxML/8.2.12''| | |[[raxml-software|RAxML]]|8.2.12|''module load RAxML/8.2.12''| |
 |[[ray-software|ray]]|2.3.1|''module load ray/2.3.1''| | |[[ray-software|ray]]|2.3.1|''module load ray/2.3.1''| |
 +|[[rcorrector-software|rcorrector]]|1.0.5|''module load rcorrector/1.0.5''| |
 |[[rdp-classifier-software|RDP Classifier]]|2.11|''module load rdp-classifier/2.11''| | |[[rdp-classifier-software|RDP Classifier]]|2.11|''module load rdp-classifier/2.11''| |
 |[[recon-software|recon]]|1.08|''module load recon/1.08''| | |[[recon-software|recon]]|1.08|''module load recon/1.08''| |
Line 285: Line 295:
 |[[repeatmodeler-software|repeatmodeler]]|2.0.1|''module load repeatmodeler/2.0.1''| | |[[repeatmodeler-software|repeatmodeler]]|2.0.1|''module load repeatmodeler/2.0.1''| |
 |[[repseqio-software|repseqio]]|1.3.3|''module load repseqio/1.3.3''| | |[[repseqio-software|repseqio]]|1.3.3|''module load repseqio/1.3.3''| |
 +|[[rgi-software|rgi]]|6.0.2|''module load rgi/6.0.2''| |
 +|[[rmblast-software|rmblast]]|2.11.0|''module load rmblast/2.11.0''| |
 |[[root-software|root]]|6.08.06|''module load root/6.08.06''| | |[[root-software|root]]|6.08.06|''module load root/6.08.06''| |
 |[[rrnaselector-software|rRNASelector]]|1.1|''module load rrnaselector/1.1''| | |[[rrnaselector-software|rRNASelector]]|1.1|''module load rrnaselector/1.1''| |
Line 290: Line 302:
 |[[rseqc-software|rseqc]]|2.6.4|''module load rseqc/2.6.4''| | |[[rseqc-software|rseqc]]|2.6.4|''module load rseqc/2.6.4''| |
 |[[ruby-software|ruby]]|2.2.3|''module load ruby/2.2.3''| | |[[ruby-software|ruby]]|2.2.3|''module load ruby/2.2.3''| |
-|[[samtools-software|samtools]]|1.13|''module load samtools/1.13''| |+|[[samtools-software|samtools]]|1.15.1|''module load samtools/1.15.1''| |
 |[[sailfish-software|sailfish]]|0.9.2|''module load sailfish/0.9.2''| | |[[sailfish-software|sailfish]]|0.9.2|''module load sailfish/0.9.2''| |
 |[[salmon-software|salmon]]|1.3.0|''module load salmon/1.3.0''| | |[[salmon-software|salmon]]|1.3.0|''module load salmon/1.3.0''| |
Line 305: Line 317:
 |[[seqwish-software|seqwish]]|0.6|''module load seqwish/0.6''| | |[[seqwish-software|seqwish]]|0.6|''module load seqwish/0.6''| |
 |[[shannon-software|shannon]]|0.0.2|''module load shannon/0.0.2''| | |[[shannon-software|shannon]]|0.0.2|''module load shannon/0.0.2''| |
 +|[[shannon_cpp-software|shannon_cpp]]|0.5.0|''module load shannon_cpp/0.5.0''| |
 |[[shasta-software|shasta]]|0.4.0|''module load shasta/0.4.0''| | |[[shasta-software|shasta]]|0.4.0|''module load shasta/0.4.0''| |
 |[[sickle-software|sickle]]|1.33|''module load sickle/1.33''| | |[[sickle-software|sickle]]|1.33|''module load sickle/1.33''| |
Line 323: Line 336:
 |[[soapdenovo-trans-software|SOAPdenovo-Trans]]|1.03|''module load SOAPdenovo-Trans/1.03''| | |[[soapdenovo-trans-software|SOAPdenovo-Trans]]|1.03|''module load SOAPdenovo-Trans/1.03''| |
 |[[solexaqa-software|SolexaQA++]]|3.1.3|''module load SolexaQA++/3.1.3''| | |[[solexaqa-software|SolexaQA++]]|3.1.3|''module load SolexaQA++/3.1.3''| |
-|[[spades-software|spades]]|3.15 (3.15.4)|''module load spades/3.15''| |+|[[spades-software|spades]]|3.15 (3.15.5)|''module load spades/3.15''| |
 |[[sourmash-software|sourmash]]|1.0|''module load sourmash/1.0''| | |[[sourmash-software|sourmash]]|1.0|''module load sourmash/1.0''| |
 |[[speedseq-software|speedseq]]|0.1.2|''module load speedseq/0.1.2''| | |[[speedseq-software|speedseq]]|0.1.2|''module load speedseq/0.1.2''| |
Line 334: Line 347:
 |[[sspace-software|sspace]]|3.0|''module load sspace/3.0''| | |[[sspace-software|sspace]]|3.0|''module load sspace/3.0''| |
 |[[sspace-longread-software|sspace-longread]]|1.1|''module load sspace-longread/1.1''| | |[[sspace-longread-software|sspace-longread]]|1.1|''module load sspace-longread/1.1''| |
-|[[stacks-software|stacks]]|1.24|''module load stacks/1.24''| |+|[[stacks-software|stacks]]|2.62|''module load stacks/2.62''| |
 |staden|2.0.0b8|''module load staden/2.0.0b8''| | |staden|2.0.0b8|''module load staden/2.0.0b8''| |
-|[[star-software|star]]|2.7.1a|''module load star/2.7.1a''| |+|[[star-software|star]]|2.7.10a|''module load star/2.7.10a''| |
 |[[structure-software|structure]]|2.3.4|''module load structure/2.3.4'' | |[[structure-software|structure]]|2.3.4|''module load structure/2.3.4'' |
 |[[stringtie-software|stringtie]]|1.3.4d|''module load stringtie/1.3.4d''| | |[[stringtie-software|stringtie]]|1.3.4d|''module load stringtie/1.3.4d''| |
 +|[[stringtie2-software|stringtie2]]|2.0.1|''module load stringtie2/2.0.1''| |
 |[[subread-software|subread]]|1.6.2|''module load subread/1.6.2''| | |[[subread-software|subread]]|1.6.2|''module load subread/1.6.2''| |
 |svmlight|V6.02|''module load svmlight/V6.02''| | |svmlight|V6.02|''module load svmlight/V6.02''| |
Line 347: Line 361:
 |[[tophat-software|tophat]]|2.1.0|''module load tophat2/2.1.0''| | |[[tophat-software|tophat]]|2.1.0|''module load tophat2/2.1.0''| |
 |[[tracer-software|tracer]]|1.6|''module load tracer/1.6''| | |[[tracer-software|tracer]]|1.6|''module load tracer/1.6''| |
 +|[[transabyss-software|transabyss]]|2.0.1|''module load transabyss/2.0.1'' |
 |[[transdecoder-software|TransDecoder]]|2.0.1|''module load TransDecoder/2.0.1'' | |[[transdecoder-software|TransDecoder]]|2.0.1|''module load TransDecoder/2.0.1'' |
 |[[transrate-software|Transrate]]|1.0.3|''module load transrate/1.0.3'' | |[[transrate-software|Transrate]]|1.0.3|''module load transrate/1.0.3'' |
list-of-software.txt · Last modified: 2024/06/19 11:50 by aorth