Differences

This shows you the differences between two versions of the page.

--- list-of-software [2022/03/23 07:56] – aorth
+++ list-of-software [2022/05/09 12:00] – aorth
@@ Line 60: / Line 60: @@
 |censor|4.2.28|''module load censor/4.2.28''| |
 |[[centrifuge-software|centrifuge]]|1.0.4|''module load centrifuge/1.0.4''| |
-|[[changeo-software|changeo]]|1.0.0|''module load changeo/1.0.0''| |
+|[[changeo-software|changeo]]|1.2.0|''module load changeo/1.2.0''| |
 |[[checkm-software|checkm]]|1.1.2|''module load checkm/1.1.2''| |
 |[[circos-software|circos]]|0.69-9|''module load circos/0.69-9''| |
@@ Line 87: / Line 87: @@
 |[[exabayes-software|exabayes]]|1.4.1|''module load exabayes/1.4.1''| |
 |[[express-software|express]]|1.5.1|''module load express/1.5.1''| |
+|[[falco-software|falco]]|0.3.0|''module load falco/0.3.0''| |
 |[[falcon-phase-software|falcon-phase]]|git-7c50154e|''module load falcon-phase/git-7c50154e''| |
 |[[fastANI-software|fastANI]]|1.3|''module load fastANI/1.3''| |
@@ Line 145: / Line 146: @@
 |[[igrec-software|igrec]]|3.0.0|''module load igrec/3.0.0''| |
 |[[igsimulator-software|igsimulator]]|git-c3778b74|''module load igsimulator/git-c3778b74''| |
-|[[iqtree-software|iqtree]]|1.6.12|''module load iqtree/1.6.12''| |
+|[[iqtree-software|iqtree]]|2.2.0|''module load iqtree/2.2.0''| |
 |[[igv-software|igv]]|2.4.5|''module load igv/2.4.5''| |
 |[[igvtools-software|igvtools]]|2.3.98|''module load igvtools/2.3.98''| |
@@ Line 211: / Line 212: @@
 |mpiblast|1.6.0|''module load mpiblast/1.6.0''| |
 |mrbayes|3.2.2|''module load mrbayes/3.2.2''| |
-|[[multiqc-software|multiqc]]|1.6|''module load multiqc/1.6''| |
+|[[multiqc-software|multiqc]]|1.12|''module load multiqc/1.12''| |
 |[[muscle-software|muscle]]|3.8.1551|''module load muscle/3.8.1551''|  |
 |[[mummer-software|mummer]]|4.0.0rc1|''module load mummer/4.0.0rc1''| |
 |[[nanopolish-software|nanopolish]]|0.10.2|''module load nanopolish/0.10.2''| |
 |[[netmhcpan-software|netmhcpan]]|2.8|''module load netmhcpan/2.8''| |
-|[[nextalign-software|nextalign]]|1.3.0|''module load nextalign/1.3.0''| |
+|[[nextalign-software|nextalign]]|1.11.0|''module load nextalign/1.11.0''| |
-|[[nextclade-software|nextclade]]|1.3.0|''module load nextclade/1.3.0''| |
+|[[nextclade-software|nextclade]]|1.11.0|''module load nextclade/1.11.0''| |
 |[[nextclip-software|nextclip]]|1.3.1|''module load nextclip/1.3.1''| |
 |[[nextflow-software|nextflow]]|21.10 (21.10.6)|''module load nextflow/21.10''| |
@@ Line 338: / Line 339: @@
 |[[structure-software|structure]]|2.3.4|''module load structure/2.3.4''|  |
 |[[stringtie-software|stringtie]]|1.3.4d|''module load stringtie/1.3.4d''| |
+|[[stringtie2-software|stringtie2]]|2.0.1|''module load stringtie2/2.0.1''| |
 |[[subread-software|subread]]|1.6.2|''module load subread/1.6.2''| |
 |svmlight|V6.02|''module load svmlight/V6.02''| |