list-of-software
Differences
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| Both sides previous revisionPrevious revisionNext revision | Previous revisionNext revisionBoth sides next revision | ||
| list-of-software [2022/02/18 14:07] – aorth | list-of-software [2022/03/04 13:52] – aorth | ||
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| |[[barrnap-software|barrnap]]|0.9|'' | |[[barrnap-software|barrnap]]|0.9|'' | ||
| |bayescan|2.1|'' | |bayescan|2.1|'' | ||
| - | |[[bbmap-software|bbmap]]|38.67|'' | + | |[[bbmap-software|bbmap]]|38.95|'' |
| |[[bcftools-software|bcftools]]|1.13|'' | |[[bcftools-software|bcftools]]|1.13|'' | ||
| |bcl2fastq|2.20.0.422|'' | |bcl2fastq|2.20.0.422|'' | ||
| Line 57: | Line 57: | ||
| |celera-wgs|6.1|'' | |celera-wgs|6.1|'' | ||
| |censor|4.2.28|'' | |censor|4.2.28|'' | ||
| + | |[[centrifuge-software|centrifuge]]|1.0.4|'' | ||
| |[[changeo-software|changeo]]|1.0.0|'' | |[[changeo-software|changeo]]|1.0.0|'' | ||
| |[[checkm-software|checkm]]|1.1.2|'' | |[[checkm-software|checkm]]|1.1.2|'' | ||
| Line 71: | Line 72: | ||
| |cufflinks|2.2.1|'' | |cufflinks|2.2.1|'' | ||
| |[[cutadapt-software|cutadapt]]|3.5|'' | |[[cutadapt-software|cutadapt]]|3.5|'' | ||
| + | |[[czid-cli-software|czid-cli]]|3.0.2|'' | ||
| |[[dextractor-software|dextractor]]|git-a7f50c52|'' | |[[dextractor-software|dextractor]]|git-a7f50c52|'' | ||
| |dendroscope|2.7.4|'' | |dendroscope|2.7.4|'' | ||
| Line 182: | Line 184: | ||
| |[[mecat-software|MECAT]]|git-d04bfa84|'' | |[[mecat-software|MECAT]]|git-d04bfa84|'' | ||
| |[[medaka-software|medaka]]|1.4.3|'' | |[[medaka-software|medaka]]|1.4.3|'' | ||
| - | |[[megahit-software|megahit]]|1.1.4|'' | + | |[[megahit-software|megahit]]|1.2.9|'' |
| |megan|4.70.4|'' | |megan|4.70.4|'' | ||
| |[[megax-software|megax]]|10.0.5|'' | |[[megax-software|megax]]|10.0.5|'' | ||
| Line 213: | Line 215: | ||
| |[[nextclade-software|nextclade]]|1.3.0|'' | |[[nextclade-software|nextclade]]|1.3.0|'' | ||
| |[[nextclip-software|nextclip]]|1.3.1|'' | |[[nextclip-software|nextclip]]|1.3.1|'' | ||
| - | |[[nextflow-software|nextflow]]|21.04.3|'' | + | |[[nextflow-software|nextflow]]|21.10 (21.10.6)|'' |
| |[[ntcard-software|ntCard]]|1.0.0|'' | |[[ntcard-software|ntCard]]|1.0.0|'' | ||
| |[[ngmlr-software|ngmlr]]|0.2.7|'' | |[[ngmlr-software|ngmlr]]|0.2.7|'' | ||
| Line 314: | Line 316: | ||
| |[[soapdenovo-trans-software|SOAPdenovo-Trans]]|1.03|'' | |[[soapdenovo-trans-software|SOAPdenovo-Trans]]|1.03|'' | ||
| |[[solexaqa-software|SolexaQA++]]|3.1.3|'' | |[[solexaqa-software|SolexaQA++]]|3.1.3|'' | ||
| - | |[[spades-software|spades]]|3.13.0|'' | + | |[[spades-software|spades]]|3.15 (3.15.4)|'' |
| |[[sourmash-software|sourmash]]|1.0|'' | |[[sourmash-software|sourmash]]|1.0|'' | ||
| |[[speedseq-software|speedseq]]|0.1.2|'' | |[[speedseq-software|speedseq]]|0.1.2|'' | ||
list-of-software.txt · Last modified: 2024/06/19 11:50 by aorth