list-of-software
Differences
This shows you the differences between two versions of the page.
Both sides previous revisionPrevious revisionNext revision | Previous revisionNext revisionBoth sides next revision | ||
list-of-software [2021/12/15 07:40] – aorth | list-of-software [2022/01/20 14:33] – aorth | ||
---|---|---|---|
Line 31: | Line 31: | ||
|[[bbmap-software|bbmap]]|38.67|'' | |[[bbmap-software|bbmap]]|38.67|'' | ||
|[[bcftools-software|bcftools]]|1.13|'' | |[[bcftools-software|bcftools]]|1.13|'' | ||
+ | |bcl2fastq|2.20.0.422|'' | ||
|[[beagle-software|beagle]]|3.1.2|'' | |[[beagle-software|beagle]]|3.1.2|'' | ||
|[[beast-software|beast]]|1.10.4|'' | |[[beast-software|beast]]|1.10.4|'' | ||
Line 40: | Line 41: | ||
|[[bitseq-software|bitseq]]|0.7.5|'' | |[[bitseq-software|bitseq]]|0.7.5|'' | ||
|[[blasr-software|blasr]]|smrtanalysis-4.0.0|'' | |[[blasr-software|blasr]]|smrtanalysis-4.0.0|'' | ||
- | |[[blast-software|blast]]|2.10.0+|'' | + | |[[blast-software|blast]]|2.12.0+|'' |
|[[blobtools-software|blobtools]]|0.9.19.3|'' | |[[blobtools-software|blobtools]]|0.9.19.3|'' | ||
|blat|06-Aug-2013|'' | |blat|06-Aug-2013|'' | ||
Line 46: | Line 47: | ||
|[[bowtie2-software|bowtie2 ]]|2.3.4.1|'' | |[[bowtie2-software|bowtie2 ]]|2.3.4.1|'' | ||
|[[brig-software|brig]]|0.95|'' | |[[brig-software|brig]]|0.95|'' | ||
- | |[[busco-software|BUSCO ]]|4.0.6|'' | + | |[[busco-software|BUSCO ]]|5.2.2|'' |
|[[bwa-software|bwa]]|0.7.17|'' | |[[bwa-software|bwa]]|0.7.17|'' | ||
|[[cafe-software|cafe]]|4.1|'' | |[[cafe-software|cafe]]|4.1|'' | ||
Line 96: | Line 97: | ||
|[[flexbar-software|flexbar]]|2.7.0|'' | |[[flexbar-software|flexbar]]|2.7.0|'' | ||
|[[flux-capacitor-software|flux-capacitor]]|1.6.1|'' | |[[flux-capacitor-software|flux-capacitor]]|1.6.1|'' | ||
- | |[[flye-software|flye]]|2.8.1|'' | + | |[[flye-software|flye]]|2.9|'' |
|frappe|1.1|'' | |frappe|1.1|'' | ||
|[[fraggenescan-software|FragGeneScan ]]|1.30|'' | |[[fraggenescan-software|FragGeneScan ]]|1.30|'' | ||
Line 183: | Line 184: | ||
|[[megax-software|megax]]|10.0.5|'' | |[[megax-software|megax]]|10.0.5|'' | ||
|[[metabat-software|metabat]]|2.12.1|'' | |[[metabat-software|metabat]]|2.12.1|'' | ||
+ | |[[metaeuk-software|metaeuk]]|git-9818d1a5|'' | ||
|[[metaphlan-software|metaphlan]]|3.0.13|'' | |[[metaphlan-software|metaphlan]]|3.0.13|'' | ||
|[[metis-software|metis]]|5.1.0|'' | |[[metis-software|metis]]|5.1.0|'' | ||
Line 283: | Line 285: | ||
|[[scipio-software|scipio]]|1.4.1|'' | |[[scipio-software|scipio]]|1.4.1|'' | ||
|[[scythe-software|scythe]]|0.994-beta|'' | |[[scythe-software|scythe]]|0.994-beta|'' | ||
- | |[[sepp-software|sepp]]|4.3.8|'' | + | |[[sepp-software|sepp]]|4.5.1|'' |
|[[seroba-software|seroba]]|1.0.0|'' | |[[seroba-software|seroba]]|1.0.0|'' | ||
|seq_crumbs|0.1.8|'' | |seq_crumbs|0.1.8|'' | ||
Line 334: | Line 336: | ||
|[[transrate-software|Transrate]]|1.0.3|'' | |[[transrate-software|Transrate]]|1.0.3|'' | ||
|[[trf-software|trf]]|4.0.9|'' | |[[trf-software|trf]]|4.0.9|'' | ||
+ | |[[trimgalore-software|trimgalore]]|0.6.7|'' | ||
|[[trimmomatic-software|trimmomatic]]|0.39|'' | |[[trimmomatic-software|trimmomatic]]|0.39|'' | ||
|[[trinity-software|trinity]]|v2.11.0|'' | |[[trinity-software|trinity]]|v2.11.0|'' |
list-of-software.txt · Last modified: 2024/06/19 11:50 by aorth