list-of-software
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list-of-software [2021/11/03 09:40] – aorth | list-of-software [2021/12/27 16:00] – aorth | ||
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|[[artemis-software|artemis]]|16.0.0|'' | |[[artemis-software|artemis]]|16.0.0|'' | ||
|[[augustus-software|augustus]]|3.3|'' | |[[augustus-software|augustus]]|3.3|'' | ||
- | |[[awscli-software|awscli]]|1.17.9|'' | + | |[[awscli-software|awscli]]|2.4.0|'' |
|[[bam-readcount-software|bam-readcount]]|0.8.0|'' | |[[bam-readcount-software|bam-readcount]]|0.8.0|'' | ||
|[[bamtools-software|bamtools]]|2.5.1|'' | |[[bamtools-software|bamtools]]|2.5.1|'' | ||
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|[[corset-software|corset]]|1.06|'' | |[[corset-software|corset]]|1.06|'' | ||
|cufflinks|2.2.1|'' | |cufflinks|2.2.1|'' | ||
- | |[[cutadapt-software|cutadapt]]|1.18|'' | + | |[[cutadapt-software|cutadapt]]|3.5|'' |
|[[dextractor-software|dextractor]]|git-a7f50c52|'' | |[[dextractor-software|dextractor]]|git-a7f50c52|'' | ||
|dendroscope|2.7.4|'' | |dendroscope|2.7.4|'' | ||
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|[[fastp-software|fastp]]|0.22.0|'' | |[[fastp-software|fastp]]|0.22.0|'' | ||
|[[fastPHASE-software|fastPHASE]]|1.4.8|'' | |[[fastPHASE-software|fastPHASE]]|1.4.8|'' | ||
- | |[[fastqc-software|fastqc]]|0.11.7|'' | + | |[[fastqc-software|fastqc]]|0.11.9|'' |
|[[faststructure-software|fastSTRUCTURE]]|1.0|'' | |[[faststructure-software|fastSTRUCTURE]]|1.0|'' | ||
|[[fasttree-software|fasttree]]|2.1.11|'' | |[[fasttree-software|fasttree]]|2.1.11|'' | ||
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|[[flexbar-software|flexbar]]|2.7.0|'' | |[[flexbar-software|flexbar]]|2.7.0|'' | ||
|[[flux-capacitor-software|flux-capacitor]]|1.6.1|'' | |[[flux-capacitor-software|flux-capacitor]]|1.6.1|'' | ||
- | |[[flye-software|flye]]|2.8.1|'' | + | |[[flye-software|flye]]|2.9|'' |
|frappe|1.1|'' | |frappe|1.1|'' | ||
|[[fraggenescan-software|FragGeneScan ]]|1.30|'' | |[[fraggenescan-software|FragGeneScan ]]|1.30|'' | ||
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|[[juicebox-software|juicebox]]|1.11.08|'' | |[[juicebox-software|juicebox]]|1.11.08|'' | ||
|[[juicer-software|juicer]]|1.6|'' | |[[juicer-software|juicer]]|1.6|'' | ||
- | |[[kaiju-software|kaiju]]|1.4.4|'' | + | |[[kaiju-software|kaiju]]|1.8.2|'' |
|[[kallisto-software|kallisto]]|0.43.0|'' | |[[kallisto-software|kallisto]]|0.43.0|'' | ||
|[[karect-software|karect]]|1.0|'' | |[[karect-software|karect]]|1.0|'' | ||
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|[[rdp-classifier-software|RDP Classifier]]|2.11|'' | |[[rdp-classifier-software|RDP Classifier]]|2.11|'' | ||
|[[recon-software|recon]]|1.08|'' | |[[recon-software|recon]]|1.08|'' | ||
- | |[[repeatmasker-software|repeatmasker]]|4.1.1|'' | + | |[[repeatmasker-software|repeatmasker]]|4.1.2-p1|'' |
|[[repeatmodeler-software|repeatmodeler]]|2.0.1|'' | |[[repeatmodeler-software|repeatmodeler]]|2.0.1|'' | ||
|[[repseqio-software|repseqio]]|1.3.3|'' | |[[repseqio-software|repseqio]]|1.3.3|'' | ||
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|[[transrate-software|Transrate]]|1.0.3|'' | |[[transrate-software|Transrate]]|1.0.3|'' | ||
|[[trf-software|trf]]|4.0.9|'' | |[[trf-software|trf]]|4.0.9|'' | ||
+ | |[[trimgalore-software|trimgalore]]|0.6.7|'' | ||
|[[trimmomatic-software|trimmomatic]]|0.39|'' | |[[trimmomatic-software|trimmomatic]]|0.39|'' | ||
|[[trinity-software|trinity]]|v2.11.0|'' | |[[trinity-software|trinity]]|v2.11.0|'' |
list-of-software.txt · Last modified: 2024/06/19 11:50 by aorth