Differences

This shows you the differences between two versions of the page.

--- list-of-software [2021/06/21 06:51] – aorth
+++ list-of-software [2021/08/29 09:12] – aorth
@@ Line 98: / Line 98: @@
 |frappe|1.1|''module load frappe/1.1''| |
 |[[fraggenescan-software|FragGeneScan ]]|1.30|''module load fraggenescan/1.30''| |
-|[[freebayes-software|FreeBayes ]]|1.0.2|''module load freebayes/1.0.2''| |
+|[[freebayes-software|freebayes]]|1.3.4|''module load freebayes/1.3.4''| |
+|[[funannotate-software|funannotate]]|1.8.7|''module load funannotate/1.8.7''| |
 |[[gassflow-software|GassFlow ]]|1.0|''module load gassflow/1.0''| |
 |[[gatk-software|GATK ]]|4.0.10.1|''module load gatk/4.0.10.1''| |
@@ Line 116: / Line 117: @@
 |[[gtdbtk-software|gtdbtk]]|1.1.1|''module load gtdbtk/1.1.1''| |
 |[[guidance-software|guidance]]|2.02|''module load guidance/2.02''| |
+|[[guppy-software|guppy]]|5.0.11|''module load guppy/5.0.11''| |
+|[[halcyon-software|halcyon]]|0.1.1|''module load halcyon/0.1.1''| |
 |[[hapflk-software|hapflk]]|1.4|''module load hapflk/1.4''| |
 |hapmix|2.0|''module load hapmix/2.0''| |
@@ Line 171: / Line 174: @@
 |[[mcl-software|mcl]]|14-137|''module load mcl/14-137''| |
 |[[mecat-software|MECAT]]|git-d04bfa84|''module load MECAT/git-d04bfa84''| |
-|[[medaka-software|medaka]]|0.8.2|''module load medaka/0.8.2''| |
+|[[medaka-software|medaka]]|1.4.3|''module load medaka/1.4.3''| |
 |[[megahit-software|megahit]]|1.1.4|''module load megahit/1.1.4''| |
 |megan|4.70.4|''module load megan/4.70.4''| |
 |[[megax-software|megax]]|10.0.5|''module load megax/10.0.5''| |
 |[[metabat-software|metabat]]|2.12.1|''module load metabat/2.12.1''| |
-|[[metaphlan2-software|metaphlan2]]|2.9.5|''module load metaphlan2/2.9.5''| |
+|[[metaphlan-software|metaphlan]]|3.0.13|''module load metaphlan/3.0.13''| |
 |[[metis-software|metis]]|5.1.0|''module load metis/5.1.0''| |
 |[[migec-software|migec]]|1.2.4a|''module load migec/1.2.4a''| |
 |[[migmap-software|migmap]]|1.0.2|''module load migmap/1.0.2''| |
 |[[miniasm-software|miniasm]]|0.3|''module load miniasm/0.3''| |
-|[[minimap2-software|minimap2]]|2.13|''module load minimap2/2.13''| |
+|[[minimap2-software|minimap2]]|2.22|''module load minimap2/2.22''| |
 |[[minpath-software|MinPath]]|1.0.2|''module load MinPath/1.2''| |
 |[[mira-software#v4.0.2|mira]]|4.0.2|''module load mira/4.0.2''| |
@@ Line 207: / Line 210: @@
 |[[ngsqctoolkit-software|ngsqctoolkit]]|2.3.3|''module load ngsqctoolkit/2.3.3''| |
 |[[nQuire-software|nQuire]]|git-a990a88e|''module load nQuire/git-a990a88e''| |
+|[[nvtop-software|nvtop]]|1.2.2|''module load nvtop/1.2.2''| |
 |novacraft|3.02.07|''module load novacraft/3.02.07''| |
 |[[oases-software|oases]]|0.2.08|''module load oases/0.2.08''| |
@@ Line 244: / Line 248: @@
 |[[provean-software|provean]]|1.1.5|''module load provean/1.1.5''| |
 |[[purge-haplotigs-software|purge_haplotigs]]|1.1.1|''module load purge_haplotigs/1.1.1''| |
-|[[python-software|python]]|3.7.10|''module load python/3.7''| |
+|[[python-software|python]]|3.8.11|''module load python/3.8''| |
 |qdd|3_beta|''module load qdd/3_beta''| |
 |[[qiime-software|qiime]]|1.9.1|''module load qiime/1.9.1''| |