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list-of-software

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list-of-software [2021/05/05 12:27] – aorthlist-of-software [2021/05/20 17:39] – aorth
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 |[[hdf5-software|hdf5]]|1.8.19|''module load hdf5/1.8.19''| | |[[hdf5-software|hdf5]]|1.8.19|''module load hdf5/1.8.19''| |
 |[[hmmer-software|hmmer]]|3.3|''module load hmmer/3.3''| | |[[hmmer-software|hmmer]]|3.3|''module load hmmer/3.3''| |
 +|[[hmmIBD-software|hmmIBD]]|2.0.4|''module load hmmIBD/2.0.4''| |
 |[[hpg-variant-software|hpg-variant]]|1.0|''module load hpg-variant/1.0''| | |[[hpg-variant-software|hpg-variant]]|1.0|''module load hpg-variant/1.0''| |
 |[[hic_qc-software|hic_qc]]|git-1e132fb2|''module load hic_qc/git-1e132fb2''| | |[[hic_qc-software|hic_qc]]|git-1e132fb2|''module load hic_qc/git-1e132fb2''| |
Line 204: Line 205:
 |[[ngmlr-software|ngmlr]]|0.2.7|''module load ngmlr/0.2.7''| | |[[ngmlr-software|ngmlr]]|0.2.7|''module load ngmlr/0.2.7''| |
 |[[ngsqctoolkit-software|ngsqctoolkit]]|2.3.3|''module load ngsqctoolkit/2.3.3''| | |[[ngsqctoolkit-software|ngsqctoolkit]]|2.3.3|''module load ngsqctoolkit/2.3.3''| |
 +|[[nQuire-software|nQuire]]|git-a990a88e|''module load nQuire/git-a990a88e''| |
 |novacraft|3.02.07|''module load novacraft/3.02.07''| | |novacraft|3.02.07|''module load novacraft/3.02.07''| |
 |[[oases-software|oases]]|0.2.08|''module load oases/0.2.08''| | |[[oases-software|oases]]|0.2.08|''module load oases/0.2.08''| |
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 |[[phylip-software|phylip]]|3.696|''module load phylip/3.696''| | |[[phylip-software|phylip]]|3.696|''module load phylip/3.696''| |
 |[[phyml-software|phyml]]|3.3.20180621|''module load phyml/3.3.20180621''| | |[[phyml-software|phyml]]|3.3.20180621|''module load phyml/3.3.20180621''| |
-|[[picard-software|picard]]|2.17.0|''module load picard/2.17.0''| |+|[[picard-software|picard]]|2.25.5|''module load picard/2.25.5''| |
 |[[picrust-software#v1.0.0|picrust]]|1.0.0|''module load picrust/1.0.0''| | |[[picrust-software#v1.0.0|picrust]]|1.0.0|''module load picrust/1.0.0''| |
 |[[pilon-software|pilon]]|1.23|''module load pilon/1.23''| | |[[pilon-software|pilon]]|1.23|''module load pilon/1.23''| |
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 |[[quickmerge-software|quickmerge]]|0.3|''module load quickmerge/0.3''| | |[[quickmerge-software|quickmerge]]|0.3|''module load quickmerge/0.3''| |
 |[[quorum-software|Quorum]]|1.1.1|''module load quorum/1.1.1''| | |[[quorum-software|Quorum]]|1.1.1|''module load quorum/1.1.1''| |
-|[[r-software|R]]|4.0.3|''module load R/4.0''| |+|[[r-software|R]]|4.0.5|''module load R/4.0''| |
 |[[racon-software|racon]]|1.3.1|''module load racon/1.3.1''| | |[[racon-software|racon]]|1.3.1|''module load racon/1.3.1''| |
 |[[rmblast-software|rmblast]]|2.11.0|''module load rmblast/2.11.0''| | |[[rmblast-software|rmblast]]|2.11.0|''module load rmblast/2.11.0''| |
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 |[[usearch-software|usearch]]| v7.0.1090 |''module load usearch/v7.0.1090''| | |[[usearch-software|usearch]]| v7.0.1090 |''module load usearch/v7.0.1090''| |
 |varscan|2.4.2|''module load varscan/2.4.2''| | |varscan|2.4.2|''module load varscan/2.4.2''| |
 +|[[vcfdo-software|vcfdo]]|git-508cc19b|''module load vcfdo/git-508cc19b''| |
 |[[vcflib-software|vcflib]]|git-7f1575e|''module load vcflib/git-7f1575e''| | |[[vcflib-software|vcflib]]|git-7f1575e|''module load vcflib/git-7f1575e''| |
 |[[vcftools-software|vcftools]]|0.1.16|''module load vcftools/0.1.16''| | |[[vcftools-software|vcftools]]|0.1.16|''module load vcftools/0.1.16''| |
list-of-software.txt · Last modified: 2024/06/19 11:50 by aorth