Differences

This shows you the differences between two versions of the page.

--- list-of-software [2021/01/06 09:22] – aorth
+++ list-of-software [2021/02/21 09:50] – aorth
@@ Line 30: / Line 30: @@
 |bayescan|2.1|''module load bayescan/2.1''| |
 |[[bbmap-software|bbmap]]|38.67|''module load bbmap/38.67''| |
-|[[bcftools-software|bcftools]]|1.8|''module load bcftools/1.8''| |
+|[[bcftools-software|bcftools]]|1.11|''module load bcftools/1.11''| |
 |[[beagle-software|beagle]]|3.1.2|''module load beagle/3.1.2''| |
 |[[beast-software|beast]]|1.10.4|''module load beast/1.10.4''| |
@@ Line 124: / Line 124: @@
 |[[htseq-software|htseq]]|0.9.1|''module load htseq/0.9.1''| |
 |[[htslib-software|htslib]]|1.11|''module load htslib/1.11''| |
+|[[hypo-software|hypo]]|1.0.3|''module load hypo/1.0.3''| |
 |[[idba-software|idba]]|1.1.2|''module load idba/1.1.2''| |
 |[[igblast-software|igblast]]|1.10.0|''module load igblast/1.10.0''| |
@@ Line 135: / Line 136: @@
 |[[interproscan-software|interproscan]]|5.13|''module load interproscan/5.13''| |
 |i-tasser|latest|''module load i-tasser/latest''| |
+|[[ivar-software|ivar]]|1.3|''module load ivar/1.3''| |
 |[[jellyfish-software|jellyfish]]|2.3.0|''module load jellyfish/2.3.0''| |
 |jMHC|1.5.0929|''module load jMHC/1.5.0929''| |
 |[[juicebox-software|juicebox]]|1.11.08|''module load juicebox/1.11.08''| |
+|[[juicer-software|juicer]]|1.6|''module load juicer/1.6''| |
 |[[kaiju-software|kaiju]]|1.4.4|''module load kaiju/1.4.4''| |
 |[[kallisto-software|kallisto]]|0.43.0|''module load kallisto/0.43.0''| |
 |[[karect-software|karect]]|1.0|''module load karect/1.0''| |
 |[[kat-software|kat]]|2.3.4|''module load kat/2.3.4''| |
-|[[kmc-software|kmc]]|3.0.0|''module load kmc/3.0.0''| |
+|[[kmc-software|kmc]]|3.1.1|''module load kmc/3.1.1''| |
 |[[kmergenie-software|kmergenie]]|1.7038|''module load kmergenie/1.7038''| |
 |[[kmer-ssr-software|kmer-ssr]]|git-4043c0e7|''module load kmer-ssr/git-4043c0e7''| |
@@ Line 194: / Line 197: @@
 |[[nanopolish-software|nanopolish]]|0.10.2|''module load nanopolish/0.10.2''| |
 |[[netmhcpan-software|netmhcpan]]|2.8|''module load netmhcpan/2.8''| |
+|[[nextclade-software|nextclade]]|0.12.0|''module load nextclade/0.12.0''| |
 |[[nextclip-software|nextclip]]|1.3.1|''module load nextclip/1.3.1''| |
 |[[nextflow-software|nextflow]]|20.04.1|''module load nextflow/20.04.1''| |
@@ Line 257: / Line 261: @@
 |[[rseqc-software|rseqc]]|2.6.4|''module load rseqc/2.6.4''| |
 |[[ruby-software|ruby]]|2.2.3|''module load ruby/2.2.3''| |
-|[[samtools-software|samtools]]|1.9|''module load samtools/1.9''| |
+|[[samtools-software|samtools]]|1.11|''module load samtools/1.11''| |
 |[[sailfish-software|sailfish]]|0.9.2|''module load sailfish/0.9.2''| |
 |[[salmon-software|salmon]]|1.3.0|''module load salmon/1.3.0''| |