Differences

This shows you the differences between two versions of the page.

--- list-of-software [2020/09/15 12:42] – aorth
+++ list-of-software [2020/10/28 09:20] – aorth
@@ Line 92: / Line 92: @@
 |[[flexbar-software|flexbar]]|2.7.0|''module load flexbar/2.7.8''| |
 |[[flux-capacitor-software|flux-capacitor]]|1.6.1|''module load flux-capacitor/1.6.1''| |
-|[[flye-software|flye]]|2.4.2|''module load flye/2.4.2''| |
+|[[flye-software|flye]]|2.8.1|''module load flye/2.8.1''| |
 |frappe|1.1|''module load frappe/1.1''| |
 |[[fraggenescan-software|FragGeneScan ]]|1.30|''module load fraggenescan/1.30''| |
@@ Line 125: / Line 125: @@
 |[[igrec-software|igrec]]|3.0.0|''module load igrec/3.0.0''| |
 |[[igsimulator-software|igsimulator]]|git-c3778b74|''module load igsimulator/git-c3778b74''| |
-|[[igtree-software|iqtree]]|1.6.12|''module load iqtree/1.6.12''| |
+|[[iqtree-software|iqtree]]|1.6.12|''module load iqtree/1.6.12''| |
 |[[igv-software|igv]]|2.4.5|''module load igv/2.4.5''| |
 |[[igvtools-software|igvtools]]|2.3.98|''module load igvtools/2.3.98''| |
@@ Line 131: / Line 131: @@
 |[[interproscan-software|interproscan]]|5.13|''module load interproscan/5.13''| |
 |i-tasser|latest|''module load i-tasser/latest''| |
-|[[jellyfish-software|jellyfish]]|2.2.9|''module load jellyfish/2.2.9''| |
+|[[jellyfish-software|jellyfish]]|2.3.0|''module load jellyfish/2.3.0''| |
 |jMHC|1.5.0929|''module load jMHC/1.5.0929''| |
 |julia|v0.1.2|''module load julia/v0.1.2''| |
@@ Line 179: / Line 179: @@
 |mkatari-ilri|latest|''module load mkatari-ilri/latest''| |
 |[[modeller-software|modeller]]|9.17|''module load modeller/9.17''| |
+|[[mosdepth-software|mosdepth]]|0.2.9|''module load mosdepth/0.2.9''| |
 |[[mothur-software|mothur]]|1.44.1|''module load mothur/1.44.1''| |
 |[[mothur-krona-software|mothur-krona]]|git-87499a0|''module load mothur-krona/git-87499a0''| |
@@ Line 216: / Line 217: @@
 |[[picrust-software#v1.0.0|picrust]]|1.0.0|''module load picrust/1.0.0''| |
 |[[pilon-software|pilon]]|1.23|''module load pilon/1.23''| |
+|[[plasmidid-software|plasmidid]]|1.6.3|''module load plasmidid/1.6.3''| |
 |[[platanus-software|platanus]]|1.2.1|''module load platanus/1.2.1''| |
 |[[plink-software|plink]]|2.00-alpha|''module load plink/2.00-alpha''| |
@@ Line 231: / Line 233: @@
 |qdd|3_beta|''module load qdd/3_beta''| |
 |[[qiime-software|qiime]]|1.9.1|''module load qiime/1.9.1''| |
-|[[qiime2-software|qiime2]]|2019.10|''module load qiime2/2019.10''| |
+|[[qiime2-software|qiime2]]|2020.8|''module load qiime2/2020.8''| |
 |[[quast-software|quast]]|5.0.2|''module load quast/5.0.2''| |
 |[[quickmerge-software|quickmerge]]|0.3|''module load quickmerge/0.3''| |
@@ Line 252: / Line 254: @@
 |[[samtools-software|samtools]]|1.9|''module load samtools/1.9''| |
 |[[sailfish-software|sailfish]]|0.9.2|''module load sailfish/0.9.2''| |
-|[[salmon-software|salmon]]|0.9.1|''module load salmon/0.9.1''| |
+|[[salmon-software|salmon]]|1.3.0|''module load salmon/1.3.0''| |
 |[[scipio-software|scipio]]|1.4.1|''module load scipio/1.4.1''| |
 |[[scythe-software|scythe]]|0.994-beta|''module load scythe/0.994-beta''| |
@@ Line 261: / Line 263: @@
 |[[seqqs-software|seqqs]]|git-3d053750|''module load seqqs/git-3d053750''| |
 |[[seqtk-software|seqtk]]|1.3|''module load seqtk/1.3''| |
+|[[seqwish-software|seqwish]]|0.6|''module load seqwish/0.6''| |
 |[[shannon-software|shannon]]|0.0.2|''module load shannon/0.0.2''| |
 |[[shasta-software|shasta]]|0.4.0|''module load shasta/0.4.0''| |
@@ Line 317: / Line 320: @@
 |[[velvet-software|velvet]]|1.2.10-kmer111|''module load velvet/1.2.10-kmer111''| |
 |[[vep-software|vep]]|92.1|''module load vep/92.1''| |
+|[[vg-software|vg]]|1.27.0|''module load vg/1.27.0''| |
 |[[viennarna-software|viennarna]]|2.4.14|''module load viennarna/2.4.14''| |
 |[[virusdetect-software|virusdetect]]|1.7|''module load virusdetect/1.7''| |