list-of-software
Differences
This shows you the differences between two versions of the page.
Both sides previous revisionPrevious revisionNext revision | Previous revisionNext revisionBoth sides next revision | ||
list-of-software [2020/04/27 13:11] – aorth | list-of-software [2020/05/12 17:05] – aorth | ||
---|---|---|---|
Line 43: | Line 43: | ||
|[[bowtie2-software|bowtie2 ]]|2.3.4.1|'' | |[[bowtie2-software|bowtie2 ]]|2.3.4.1|'' | ||
|[[brig-software|brig]]|0.95|'' | |[[brig-software|brig]]|0.95|'' | ||
- | |[[busco-software|BUSCO ]]|3.0.2|'' | + | |[[busco-software|BUSCO ]]|4.0.6|'' |
|[[bwa-software|bwa]]|0.7.15|'' | |[[bwa-software|bwa]]|0.7.15|'' | ||
|[[cafe-software|cafe]]|4.1|'' | |[[cafe-software|cafe]]|4.1|'' | ||
Line 78: | Line 78: | ||
|[[exabayes-software|exabayes]]|1.4.1|'' | |[[exabayes-software|exabayes]]|1.4.1|'' | ||
|[[express-software|express]]|1.5.1|'' | |[[express-software|express]]|1.5.1|'' | ||
+ | |[[fastANI-software|fastANI]]|1.3|'' | ||
|[[fastPHASE-software|fastPHASE]]|1.4.8|'' | |[[fastPHASE-software|fastPHASE]]|1.4.8|'' | ||
|[[fastqc-software|fastqc]]|0.11.7|'' | |[[fastqc-software|fastqc]]|0.11.7|'' | ||
|[[faststructure-software|fastSTRUCTURE]]|1.0|'' | |[[faststructure-software|fastSTRUCTURE]]|1.0|'' | ||
+ | |[[fasttree-software|fasttree]]|2.1.11|'' | ||
|[[fastx-toolkit-software|fastx_toolkit]]|0.0.13|'' | |[[fastx-toolkit-software|fastx_toolkit]]|0.0.13|'' | ||
|figtree|1.4.0|'' | |figtree|1.4.0|'' | ||
Line 106: | Line 108: | ||
|[[groovy-software|groovy]]|2.4.9|'' | |[[groovy-software|groovy]]|2.4.9|'' | ||
|[[gsea-software|GSEA]]|2.2.3|'' | |[[gsea-software|GSEA]]|2.2.3|'' | ||
+ | |[[gtdbtk-software|gtdbtk]]|1.1.1|'' | ||
|[[guidance-software|guidance]]|2.02|'' | |[[guidance-software|guidance]]|2.02|'' | ||
|[[hapflk-software|hapflk]]|1.4|'' | |[[hapflk-software|hapflk]]|1.4|'' | ||
Line 148: | Line 151: | ||
|[[marginalign-software|marginalign]]|git-2369dafd|'' | |[[marginalign-software|marginalign]]|git-2369dafd|'' | ||
|[[marginpolish-software|marginpolish]]|1.0.0|'' | |[[marginpolish-software|marginpolish]]|1.0.0|'' | ||
- | |[[mash-software|mash]]|2.0|'' | + | |[[mash-software|mash]]|2.2|'' |
|[[masurca-software|masurca]]|3.3.1|'' | |[[masurca-software|masurca]]|3.3.1|'' | ||
|mauve|2.3.1|'' | |mauve|2.3.1|'' | ||
Line 167: | Line 170: | ||
|[[minimap2-software|minimap2]]|2.13|'' | |[[minimap2-software|minimap2]]|2.13|'' | ||
|[[minpath-software|MinPath]]|1.0.2|'' | |[[minpath-software|MinPath]]|1.0.2|'' | ||
- | |[[mira-software# | + | |[[mira-software# |
+ | |[[mirdeep2-software|mirdeep2]]|0.1.3|'' | ||
|[[mitools-software|mitools]]|1.4|'' | |[[mitools-software|mitools]]|1.4|'' | ||
|[[mixcr-software|mixcr]]|3.0.11|'' | |[[mixcr-software|mixcr]]|3.0.11|'' | ||
Line 230: | Line 234: | ||
|[[racon-software|racon]]|1.3.1|'' | |[[racon-software|racon]]|1.3.1|'' | ||
|[[rmblast-software|rmblast]]|2.2.28|'' | |[[rmblast-software|rmblast]]|2.2.28|'' | ||
- | |rapsearch|2.10|'' | + | |[[rapsearch-software|rapsearch]]|2.22|'' |
|[[ratt-software|RATT]]|r18|'' | |[[ratt-software|RATT]]|r18|'' | ||
|[[raxml-software|RAxML]]|8.2.12|'' | |[[raxml-software|RAxML]]|8.2.12|'' | ||
Line 247: | Line 251: | ||
|[[scipio-software|scipio]]|1.4.1|'' | |[[scipio-software|scipio]]|1.4.1|'' | ||
|[[scythe-software|scythe]]|0.994-beta|'' | |[[scythe-software|scythe]]|0.994-beta|'' | ||
+ | |[[sepp-software|sepp]]|4.3.8|'' | ||
|[[seroba-software|seroba]]|1.0.0|'' | |[[seroba-software|seroba]]|1.0.0|'' | ||
|seq_crumbs|0.1.8|'' | |seq_crumbs|0.1.8|'' |
list-of-software.txt · Last modified: 2024/06/19 11:50 by aorth