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list-of-software

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list-of-software [2020/04/21 07:46] – aorthlist-of-software [2020/04/27 14:26] – aorth
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 |[[blobtools-software|blobtools]]|0.9.19.3|''module load blobtools/0.9.19.3''| | |[[blobtools-software|blobtools]]|0.9.19.3|''module load blobtools/0.9.19.3''| |
 |blat|06-Aug-2013|''module load blat/06-Aug-2013''| | |blat|06-Aug-2013|''module load blat/06-Aug-2013''| |
-|[[bowtie-software|bowtie1 ]]|1.1.1|''module load bowtie/1.1.1''| |+|[[bowtie-software|bowtie1 ]]|1.2.3|''module load bowtie/1.2.3''| |
 |[[bowtie2-software|bowtie2 ]]|2.3.4.1|''module load bowtie2/2.3.4.1''| | |[[bowtie2-software|bowtie2 ]]|2.3.4.1|''module load bowtie2/2.3.4.1''| |
 |[[brig-software|brig]]|0.95|''module load brig/0.95''| | |[[brig-software|brig]]|0.95|''module load brig/0.95''| |
Line 167: Line 167:
 |[[minimap2-software|minimap2]]|2.13|''module load minimap2/2.13''| | |[[minimap2-software|minimap2]]|2.13|''module load minimap2/2.13''| |
 |[[minpath-software|MinPath]]|1.0.2|''module load MinPath/1.2''| | |[[minpath-software|MinPath]]|1.0.2|''module load MinPath/1.2''| |
-|[[mira-software#v4.0.2|mira ]]|4.0.2|''module load mira/4.0.2''| |+|[[mira-software#v4.0.2|mira]]|4.0.2|''module load mira/4.0.2''| | 
 +|[[mirdeep2-software|mirdeep2]]|0.1.3|''module load mirdeep2/0.1.3''| |
 |[[mitools-software|mitools]]|1.4|''module load mitools/1.4''| | |[[mitools-software|mitools]]|1.4|''module load mitools/1.4''| |
 |[[mixcr-software|mixcr]]|3.0.11|''module load mixcr/3.0.11''| | |[[mixcr-software|mixcr]]|3.0.11|''module load mixcr/3.0.11''| |
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 |splitstree|4.11.3|''module load splitstree/4.11.3''| | |splitstree|4.11.3|''module load splitstree/4.11.3''| |
 |spread|1.0.6|''module load spread/1.0.6''| | |spread|1.0.6|''module load spread/1.0.6''| |
 +|[[squid-software|squid]]|1.9g|''module load squid/1.9g''| |
 |[[sratoolkit-software|sratoolkit]]|2.10.0|''module load sratoolkit/2.10.0''| | |[[sratoolkit-software|sratoolkit]]|2.10.0|''module load sratoolkit/2.10.0''| |
 |[[sspace-software|sspace]]|3.0|''module load sspace/3.0''| | |[[sspace-software|sspace]]|3.0|''module load sspace/3.0''| |
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 |[[velvet-software|velvet]]|1.2.10-kmer111|''module load velvet/1.2.10-kmer111''| | |[[velvet-software|velvet]]|1.2.10-kmer111|''module load velvet/1.2.10-kmer111''| |
 |[[vep-software|vep]]|92.1|''module load vep/92.1''| | |[[vep-software|vep]]|92.1|''module load vep/92.1''| |
-|[[vsearch-software|vsearch]]|2.8.0|''module load vsearch/2.8.0''| |+|[[viennarna-software|viennarna]]|2.4.14|''module load viennarna/2.4.14''| |
 |[[virusdetect-software|virusdetect]]|1.7|''module load virusdetect/1.7''| | |[[virusdetect-software|virusdetect]]|1.7|''module load virusdetect/1.7''| |
 |[[vntrseek-software|vntrseek]]|1.08|''module load vntrseek/1.08''| | |[[vntrseek-software|vntrseek]]|1.08|''module load vntrseek/1.08''| |
 +|[[vsearch-software|vsearch]]|2.8.0|''module load vsearch/2.8.0''| |
 |[[w2rap-software|w2rap]]|git-60781b6c|''module load w2rap/git-60781b6c''| | |[[w2rap-software|w2rap]]|git-60781b6c|''module load w2rap/git-60781b6c''| |
 |[[w2rap-contigger-software|w2rap-contigger]]|git-a43f5a05|''module load w2rap-contigger/git-a43f5a05''| | |[[w2rap-contigger-software|w2rap-contigger]]|git-a43f5a05|''module load w2rap-contigger/git-a43f5a05''| |
list-of-software.txt · Last modified: 2024/06/19 11:50 by aorth