Differences

This shows you the differences between two versions of the page.

--- list-of-software [2020/04/07 13:37] – aorth
+++ list-of-software [2020/04/27 12:19] – aorth
@@ Line 40: / Line 40: @@
 |[[blobtools-software|blobtools]]|0.9.19.3|''module load blobtools/0.9.19.3''| |
 |blat|06-Aug-2013|''module load blat/06-Aug-2013''| |
-|[[bowtie-software|bowtie1 ]]|1.1.1|''module load bowtie/1.1.1''| |
+|[[bowtie-software|bowtie1 ]]|1.2.3|''module load bowtie/1.2.3''| |
 |[[bowtie2-software|bowtie2 ]]|2.3.4.1|''module load bowtie2/2.3.4.1''| |
 |[[brig-software|brig]]|0.95|''module load brig/0.95''| |
@@ Line 116: / Line 116: @@
 |[[htslib-software|htslib]]|1.9|''module load htslib/1.9''| |
 |[[idba-software|idba]]|1.1.2|''module load idba/1.1.2''| |
-|[[igblast-software|igblast]]|1.6.0|''module load igblast/1.6.0''| |
+|[[igblast-software|igblast]]|1.10.0|''module load igblast/1.10.0''| |
+|[[igdiscover-software|igdiscover]]|0.12.3|''module load igdiscover/0.12.3''| |
 |[[igrec-software|igrec]]|3.0.0|''module load igrec/3.0.0''| |
 |[[igsimulator-software|igsimulator]]|git-c3778b74|''module load igsimulator/git-c3778b74''| |
@@ Line 176: / Line 177: @@
 |mrbayes|3.2.2|''module load mrbayes/3.2.2''| |
 |[[multiqc-software|multiqc]]|1.4|''module load multiqc/1.4''| |
-|[[muscle-software|muscle]]|3.8.31|''module load muscle/3.8.31''|  |
+|[[muscle-software|muscle]]|3.8.1551|''module load muscle/3.8.1551''|  |
 |[[mummer-software|MUMmer]]|3.23|''module load MUMmer/3.23''| |
 |[[nanopolish-software|nanopolish]]|0.10.2|''module load nanopolish/0.10.2''| |
@@ Line 195: / Line 196: @@
 |[[pandaseq-software|pandaseq]]|2.8.1|''module load pandaseq/2.8.1''|  |
 |[[pasta-software|pasta]]|d939adb2|''module load pasta/d939adb2''|  |
-|[[pear-software|pear]]|git-2c309dc|''module load pear/git-2c309dc''| |
+|[[pear-software|pear]]|0.9.6|''module load pear/0.9.6''| |
 |[[pblat-software|pblat]]|2.1|''module load pblat/2.1''| |
 |[[pbsuite-software|pbsuite]]|15.8.24|''module load pbsuite/15.8.24''| |
@@ Line 215: / Line 216: @@
 |[[presto-software|presto]]|0.5.13|''module load presto/0.5.13''| |
 |primer3|2.3.6|''module load primer3/2.3.6''| |
+|[[prinseq-software|prinseq]]|0.20.4|''module load prinseq/0.20.4''| |
 |[[prodigal-software|prodigal]]|2.6.3|''module load prodigal/2.6.3''| |
 |[[prokka-software|prokka]]|1.11|''module load prokka/1.11''| |
 |[[provean-software|provean]]|1.1.5|''module load provean/1.1.5''| |
-|[[python-software|python]]|3.7.2|''module load python/3.7''| |
+|[[python-software|python]]|3.7.7|''module load python/3.7''| |
 |qdd|3_beta|''module load qdd/3_beta''| |
 |[[qiime-software|qiime]]|1.9.1|''module load qiime/1.9.1''| |
@@ Line 304: / Line 306: @@
 |[[velvet-software|velvet]]|1.2.10-kmer111|''module load velvet/1.2.10-kmer111''| |
 |[[vep-software|vep]]|92.1|''module load vep/92.1''| |
-|[[vsearch-software|vsearch]]|2.8.0|''module load vsearch/2.8.0''| |
+|[[viennarna-software|viennarna]]|2.4.14|''module load viennarna/2.4.14''| |
 |[[virusdetect-software|virusdetect]]|1.7|''module load virusdetect/1.7''| |
 |[[vntrseek-software|vntrseek]]|1.08|''module load vntrseek/1.08''| |
+|[[vsearch-software|vsearch]]|2.8.0|''module load vsearch/2.8.0''| |
 |[[w2rap-software|w2rap]]|git-60781b6c|''module load w2rap/git-60781b6c''| |
 |[[w2rap-contigger-software|w2rap-contigger]]|git-a43f5a05|''module load w2rap-contigger/git-a43f5a05''| |