list-of-software
Differences
This shows you the differences between two versions of the page.
| Both sides previous revisionPrevious revisionNext revision | Previous revisionNext revisionBoth sides next revision | ||
| list-of-software [2020/03/15 11:21] – aorth | list-of-software [2020/04/07 13:37] – aorth | ||
|---|---|---|---|
| Line 37: | Line 37: | ||
| |[[bitseq-software|bitseq]]|0.7.5|'' | |[[bitseq-software|bitseq]]|0.7.5|'' | ||
| |[[blasr-software|blasr]]|smrtanalysis-4.0.0|'' | |[[blasr-software|blasr]]|smrtanalysis-4.0.0|'' | ||
| - | |[[blast-software|blast]]|2.6.0+|'' | + | |[[blast-software|blast]]|2.10.0+|'' |
| |[[blobtools-software|blobtools]]|0.9.19.3|'' | |[[blobtools-software|blobtools]]|0.9.19.3|'' | ||
| |blat|06-Aug-2013|'' | |blat|06-Aug-2013|'' | ||
| Line 55: | Line 55: | ||
| |[[changeo-software|changeo]]|0.3.9|'' | |[[changeo-software|changeo]]|0.3.9|'' | ||
| |[[checkm-software|checkm]]|1.1.2|'' | |[[checkm-software|checkm]]|1.1.2|'' | ||
| - | |[[circos-software|circos]]|0.67|'' | + | |[[circos-software|circos]]|0.69-9|'' |
| |[[clonalframe-software|clonalframe]]|1.2|'' | |[[clonalframe-software|clonalframe]]|1.2|'' | ||
| |[[clonalframeml-software|clonalframeml]]|1.0|'' | |[[clonalframeml-software|clonalframeml]]|1.0|'' | ||
| Line 110: | Line 110: | ||
| |hapmix|2.0|'' | |hapmix|2.0|'' | ||
| |[[hdf5-software|hdf5]]|1.8.19|'' | |[[hdf5-software|hdf5]]|1.8.19|'' | ||
| - | |[[hmmer-software|hmmer]]|3.1b2|'' | + | |[[hmmer-software|hmmer]]|3.3|'' |
| |[[hpg-variant-software|hpg-variant]]|1.0|'' | |[[hpg-variant-software|hpg-variant]]|1.0|'' | ||
| |[[hisat2-software|hisat2]]|2.1.0|'' | |[[hisat2-software|hisat2]]|2.1.0|'' | ||
| Line 118: | Line 118: | ||
| |[[igblast-software|igblast]]|1.6.0|'' | |[[igblast-software|igblast]]|1.6.0|'' | ||
| |[[igrec-software|igrec]]|3.0.0|'' | |[[igrec-software|igrec]]|3.0.0|'' | ||
| + | |[[igsimulator-software|igsimulator]]|git-c3778b74|'' | ||
| |[[igv-software|igv]]|2.4.5|'' | |[[igv-software|igv]]|2.4.5|'' | ||
| |[[igvtools-software|igvtools]]|2.3.98|'' | |[[igvtools-software|igvtools]]|2.3.98|'' | ||
| Line 212: | Line 213: | ||
| |[[pplacer-software|pplacer]]|1.1.alpha19|'' | |[[pplacer-software|pplacer]]|1.1.alpha19|'' | ||
| |[[prank-software|prank]]|170427|'' | |[[prank-software|prank]]|170427|'' | ||
| - | |[[presto-software|presto]]|0.5.3|'' | + | |[[presto-software|presto]]|0.5.13|'' |
| |primer3|2.3.6|'' | |primer3|2.3.6|'' | ||
| |[[prodigal-software|prodigal]]|2.6.3|'' | |[[prodigal-software|prodigal]]|2.6.3|'' | ||
| Line 221: | Line 222: | ||
| |[[qiime-software|qiime]]|1.9.1|'' | |[[qiime-software|qiime]]|1.9.1|'' | ||
| |[[qiime2-software|qiime2]]|2019.10|'' | |[[qiime2-software|qiime2]]|2019.10|'' | ||
| - | |[[quast-software|quast]]|4.5|'' | + | |[[quast-software|quast]]|5.0.2|'' |
| |[[quickmerge-software|quickmerge]]|0.3|'' | |[[quickmerge-software|quickmerge]]|0.3|'' | ||
| |[[quorum-software|Quorum]]|1.1.1|'' | |[[quorum-software|Quorum]]|1.1.1|'' | ||
| Line 233: | Line 234: | ||
| |[[rdp-classifier-software|RDP Classifier]]|2.11|'' | |[[rdp-classifier-software|RDP Classifier]]|2.11|'' | ||
| |repeatmasker|4.0.5|'' | |repeatmasker|4.0.5|'' | ||
| + | |[[repseqio-software|repseqio]]|1.3.3|'' | ||
| |[[root-software|root]]|6.08.06|'' | |[[root-software|root]]|6.08.06|'' | ||
| |[[rrnaselector-software|rRNASelector]]|1.1|'' | |[[rrnaselector-software|rRNASelector]]|1.1|'' | ||
list-of-software.txt · Last modified: 2024/06/19 11:50 by aorth