juicer-software
Differences
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juicer-software [2021/01/19 07:50] – created aorth | juicer-software [2021/01/19 07:54] – aorth | ||
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$ juicer.sh -h</ | $ juicer.sh -h</ | ||
+ | |||
+ | Testing juicer with the included sample data: | ||
+ | |||
+ | < | ||
+ | $ mkdir -p 2021-01-18-juicer/ | ||
+ | $ cd 2021-01-18-juicer/ | ||
+ | $ wget http:// | ||
+ | $ cd - | ||
+ | $ juicer.sh -d ~/ | ||
===== Installation ====== | ===== Installation ====== | ||
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**Note 1:** There are several modifications we need to do to get juicer.sh to run on our cluster. First, the addition of a check to see if it is running at ILRI versus Aiden lab, and second to remove the SBATCH memory options because we don't use those on our cluster. | **Note 1:** There are several modifications we need to do to get juicer.sh to run on our cluster. First, the addition of a check to see if it is running at ILRI versus Aiden lab, and second to remove the SBATCH memory options because we don't use those on our cluster. | ||
- | |||
- | Testing juicer with the included sample data: | ||
- | |||
- | < | ||
- | $ mkdir -p 2021-01-18-juicer/ | ||
- | $ cd 2021-01-18-juicer/ | ||
- | $ wget http:// | ||
- | $ cd - | ||
- | $ juicer.sh -d ~/ |
juicer-software.txt · Last modified: 2021/01/19 07:54 by aorth