ivar-software
Differences
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| Next revision | Previous revision | ||
| ivar-software [2021/01/17 10:14] – created aorth | ivar-software [2021/09/05 09:25] (current) – aorth | ||
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| ===== Information ===== | ===== Information ===== | ||
| - | * Version: 1.3 | + | * Version: 1.3.1 |
| * Added: January, 2021 | * Added: January, 2021 | ||
| - | * Link: https:// | + | |
| + | | ||
| ===== Usage ===== | ===== Usage ===== | ||
| Line 14: | Line 15: | ||
| Load one version into your environment and run it: | Load one version into your environment and run it: | ||
| - | < | + | < |
| $ ivar</ | $ ivar</ | ||
| Line 21: | Line 22: | ||
| < | < | ||
| - | $ wget https:// | + | $ wget https:// |
| - | $ tar xf v1.3.tar.gz | + | $ tar xf v1.3.1.tar.gz |
| - | $ cd ivar-1.3 | + | $ cd ivar-1.3.1 |
| # iVar needs GCC >= 5.0.0, CentOS 7 has 4.8.5 | # iVar needs GCC >= 5.0.0, CentOS 7 has 4.8.5 | ||
| $ sudo yum install devtoolset-7-gcc devtoolset-7-gcc-c++ | $ sudo yum install devtoolset-7-gcc devtoolset-7-gcc-c++ | ||
| Line 29: | Line 30: | ||
| $ ./ | $ ./ | ||
| $ module load htslib/1.11 | $ module load htslib/1.11 | ||
| - | $ ./configure --with-hts=/ | + | $ ./configure --with-hts=/ |
| $ make | $ make | ||
| - | $ sudo mkdir -p / | + | $ sudo mkdir -p / |
| - | $ sudo chown aorth / | + | $ sudo chown aorth / |
| $ make install | $ make install | ||
| - | $ sudo chown -R root:root / | + | $ sudo chown -R root:root / |
ivar-software.1610878451.txt.gz · Last modified: 2021/01/17 10:14 by aorth