interproscan
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interproscan [2011/07/20 08:21] – aorth | interproscan [2011/07/21 10:27] (current) – aorth | ||
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===== Interproscan ===== | ===== Interproscan ===== | ||
- | |||
- | Change EBI logo to ILRI logo on wait page? | ||
Official FTP: ftp:// | Official FTP: ftp:// | ||
Line 56: | Line 54: | ||
< | < | ||
- | ===== Accessing Interproscan | + | ==== Getting the files ==== |
- | http://hpc.ilri.cgiar.org/ | + | iprscan will unzip into its own folder, so you don't need to create one to hold all these files. |
+ | < | ||
+ | wget ftp:// | ||
+ | wget ftp:// | ||
+ | wget ftp:// | ||
+ | wget ftp:// | ||
+ | </ | ||
+ | |||
+ | ==== Unzipping | ||
+ | < | ||
+ | tar zxf iprscan_DATA_33.0.tar.gz | ||
+ | tar zxf iprscan_MATCH_DATA_33.0.tar.gz | ||
+ | tar zxf iprscan_PTHR_DATA_31.0.tar.gz | ||
+ | tar zxf iprscan_v4.8.tar.gz</ | ||
+ | |||
+ | ==== Configuration ==== | ||
+ | Create the destination directory and move the unzipped '' | ||
+ | < | ||
+ | sudo mv iprscan / | ||
+ | cd / | ||
+ | ./ | ||
+ | Wait a sec while it formats the databases... | ||
+ | |||
+ | ==== Testing ==== | ||
+ | < | ||
+ | |||
+ | ==== Apache config ==== | ||
+ | Paste the following in /// | ||
+ | < | ||
+ | Alias /images/ "/ | ||
+ | Alias /tmp/ "/ | ||
+ | |||
+ | | ||
+ | |||
+ | < | ||
+ | | ||
+ | | ||
+ | Order allow, | ||
+ | Allow from all | ||
+ | </ | ||
+ | |||
+ | < | ||
+ | | ||
+ | IndexIgnore */.??* *~ *# */HEADER* */README* */RCS | ||
+ | AllowOverride AuthConfig Limit FileInfo | ||
+ | Order deny,allow | ||
+ | Deny from all | ||
+ | Allow from .ilri.cgiar.org | ||
+ | </ | ||
+ | And then restart Apache with '' | ||
+ | === Apache write permissions === | ||
+ | Make sure Apache can write to the iprscan folder! | ||
+ | < |
interproscan.1311150065.txt.gz · Last modified: 2011/07/20 08:21 by aorth