Differences

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--- interproscan [2009/11/09 08:33] – 172.26.0.166
+++ interproscan [2011/07/20 08:14] – aorth
@@ Line 1: / Line 1: @@
 ===== Interproscan =====
-Check configuration to use LSF.
-Download and install lates databases.
+Change EBI logo to ILRI logo on wait page?
-Change EBI logo to ILRI logo on wait page.
+http://hpc.ilri.cgiar.org/iprscan/iprscan
 ===== Installation =====
 ==== Requirements ====
-Fro m the readme, these packages must be installed on the head node and any compute nodes! Make sure they work!
+From the readme, in addition to Bioperl, these packages must be installed on the head node and any compute nodes! Make sure they work!
 <file>
 .1 Perl
@@ Line 30: / Line 30: @@
   * URI::Escape
   * IO::String</file>
+Here is a script you can use to test if these modules are working on a particular node:
+<file>#!/usr/bin/perl
+use DB_File;
+use XML::Parser;
+use XML::Quote;
+use English;
+use File::Basename;
+use File::Copy;
+use File::Path;
+use File::Spec::Functions;
+use Sys::Hostname;
+use Mail::Send;
+use FileHandle;
+use IO::Scalar;
+use CGI;
+use URI::Escape;
+use IO::String;
+use Bio::Perl;
+exit;</file>
+Run it on a node like this:
+<code>$ rocks run host compute-0-16 'perl scripts/testperl.pl'</code>
+If it is successful you should not see any output.
+==== Accessing Interproscan ====
+http://hpc.ilri.cgiar.org/iprscan/iprscan