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interproscan [2009/09/11 06:27] – created 172.26.0.166interproscan [2009/11/09 08:33] 172.26.0.166
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-====== Interproscan ======+===== Interproscan =====
 Check configuration to use LSF. Check configuration to use LSF.
-Download and install lates databases + 
-Change EBI logo to ILRI logo+Download and install lates databases
 + 
 +Change EBI logo to ILRI logo on wait page. 
 + 
 +===== Installation ===== 
 +==== Requirements ==== 
 +Fro m the readme, these packages must be installed on the head node and any compute nodes! Make sure they work! 
 +<file> 
 +1.1 Perl 
 +The InterProScan package has been developed in Perl5 under UNIX and requires 
 +that various perl modules be installed beforehand.  Please note that all these 
 +modules are available via the CPAN website (http://search.cpan.org/
 +  * DB_File.pm - the interface to Berkeley DB, which is a part of the standard Perl5 distribution. 
 +  * XML::Parser.pm - libexpat (1.95.5 or newer) which is needed for the new implementation of 
 +    BlastProDom and to parse xml outputs. 
 +  * XML::Quote 
 +  * English 
 +  * File::Basename 
 +  * File::Copy 
 +  * File::Path 
 +  * File::Spec::Functions 
 +  * Sys::Hostname 
 +  * Mail::Send 
 +  * FileHandle 
 +  * IO::Scalar 
 +  * CGI 
 +  * URI::Escape 
 +  * IO::String</file>
interproscan.txt · Last modified: 2011/07/21 10:27 by aorth