installing_gbrowse2
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installing_gbrowse2 [2012/02/14 13:54] – ikahugu | installing_gbrowse2 [2012/02/14 14:12] (current) – ikahugu | ||
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1. Install prerequisites | 1. Install prerequisites | ||
[[http:// | [[http:// | ||
+ | |||
+ | < | ||
+ | sudo perl -MCPAN -e ' | ||
+ | sudo perl -MCPAN -e ' | ||
+ | sudo perl -MCPAN -e ' | ||
+ | sudo perl -MCPAN -e ' | ||
+ | sudo perl -MCPAN -e ' | ||
+ | sudo perl -MCPAN -e ' | ||
+ | </ | ||
2.Install automatically using CPAN shell | 2.Install automatically using CPAN shell | ||
Line 20: | Line 29: | ||
</ | </ | ||
- | 3. | + | |
+ | 3.Edit the following lines in / | ||
+ | < | ||
+ | 65 upload_db_adaptor = DBI:: | ||
+ | 66 upload_db_host | ||
+ | 67 upload_db_user | ||
+ | 68 upload_db_pass | ||
+ | |||
+ | 4. Create gbrowse user in mysql | ||
+ | < | ||
+ | GRANT USAGE ON *.* TO ' | ||
+ | GRANT ALL PRIVILEGES ON `userdata\_%`.* TO ' | ||
+ | GRANT ALL PRIVILEGES ON `gbrowse_login`.* TO ' | ||
+ | GRANT ALL PRIVILEGES ON `gbrowse_login`.`gbrowse_login` TO ' | ||
+ | </ | ||
+ | |||
+ | 5. Create gbrowse user | ||
+ | < | ||
+ | sudo -u apache gbrowse_create_account.pl gbrowse | ||
+ | |||
+ | New password for gbrowse: | ||
+ | New password for gbrowse (confirm): | ||
+ | Enter user's full name (optional): | ||
+ | Enter user's email address (optional): i.kahugu@cgiar.org | ||
+ | Account " | ||
+ | </ | ||
+ | |||
+ | 6. Load Meta data to db | ||
+ | < | ||
+ | / | ||
+ | </ | ||
+ | |||
+ | 7. Set admin account | ||
+ | < | ||
+ | </ | ||
+ | |||
+ | 8. Setup email forwarding | ||
+ | |||
+ | **Edit the necessary lines on / | ||
+ | < | ||
+ | 191 # here are some common options | ||
+ | 192 # smtp_gateway | ||
+ | 193 # | ||
+ | 194 smtp_gateway | ||
+ | 195 # smtp_gateway | ||
+ | 196 # | ||
+ | 197 | ||
+ | 198 # These values are used in the login confirmation message sent during | ||
+ | 199 # user registration. You may customize | ||
+ | 200 application_name | ||
+ | 201 application_name_long | ||
+ | 202 email_address | ||
+ | |||
+ | </ | ||
+ | 9. Start gbrowse | ||
+ | < | ||
+ | http:// | ||
+ | |||
+ | |||
+ | |||
+ | |||
+ | |||
+ | |||
+ |
installing_gbrowse2.1329227689.txt.gz · Last modified: 2012/02/14 13:54 by ikahugu