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igv-software [2017/02/06 09:26] – created joguyaigv-software [2017/12/26 14:55] (current) aorth
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-====== Integrative Genomics Viewer(IGV) ====== +====== Integrative Genomics Viewer (IGV) ====== 
- +Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets.
-Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets +
 ===== Information ===== ===== Information =====
  
-  * Latest Version: 2.3.90+  * Latest Version: 2.4.
 +  * Added: June, 2014
   * Updated: February, 2017   * Updated: February, 2017
-  * Added: June, 2014 
   * Link: https://software.broadinstitute.org/software/igv   * Link: https://software.broadinstitute.org/software/igv
  
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 <code>$ module avail igv</code> <code>$ module avail igv</code>
  
-Load igv +Load one version into your environment and run it: 
-<code>$ module load igv/2.3.90</code>+<code>$ module load igv/2.4.5 
 +$ igv.sh</code>
  
 ===== Installation ====== ===== Installation ======
- 
 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
-<code> 
-$ cd /tmp 
-$ wget "http://data.broadinstitute.org/igv/projects/downloads/IGV_2.3.90.zip" 
-$ unzip IGV_2.3.90.zip  
-$ cd IGV_2.3.90 
-$ ln -s igv.sh igv 
-$ sudo mkdir /export/apps/igv/2.3.90/ 
-$ sudo cp -rv . /export/apps/igv/2.3.90/ 
-</code> 
  
 +<code>$ wget http://data.broadinstitute.org/igv/projects/downloads/2.4/IGV_2.4.5.zip
 +$ sudo mkdir -p /export/apps/igv/2.4.5
 +$ sudo cp -r IGV_2.4.5/ /export/apps/igv/2.4.5
 +$ sudo chmod -x /export/apps/igv/2.4.5/igv.{bat,command}</code>
igv-software.1486373184.txt.gz · Last modified: 2017/02/06 09:26 by joguya