Differences

This shows you the differences between two versions of the page.

--- igv-software [2017/12/26 09:45] – [Integrative Genomics Viewer(IGV)] aorth
+++ igv-software [2017/12/26 14:54] – [Integrative Genomics Viewer (IGV)] aorth
@@ Line 1: / Line 1: @@
 ====== Integrative Genomics Viewer (IGV) ======
-Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets
+Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets.
 ===== Information =====
-  * Latest Version: 2.3.90
+  * Latest Version: 2.4.5
+  * Added: June, 2014
   * Updated: February, 2017
-  * Added: June, 2014
   * Link: https://software.broadinstitute.org/software/igv
@@ Line 14: / Line 13: @@
 <code>$ module avail igv</code>
-Load igv
+Load one version into your environment and run it:
-<code>$ module load igv/2.3.90</code>
+<code>$ module load igv/4.5
+$ igv.sh</code>
 ===== Installation ======
 Notes from the sysadmin during installation:
-<code>
-$ cd /tmp
-$ wget "http://data.broadinstitute.org/igv/projects/downloads/IGV_2.3.90.zip"
-$ unzip IGV_2.3.90.zip
-$ cd IGV_2.3.90
-$ ln -s igv.sh igv
-$ sudo mkdir /export/apps/igv/2.3.90/
-$ sudo cp -rv . /export/apps/igv/2.3.90/
-</code>
+<code>$ wget http://data.broadinstitute.org/igv/projects/downloads/2.4/IGV_2.4.5.zip
+$ sudo mkdir -p /export/apps/igv/2.4.5
+$ sudo cp -r IGV_2.4.5/*  /export/apps/igv/2.4.5
+$ sudo chmod -x /export/apps/igv/2.4.5/igv.{bat,command}</code>