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igdiscover-software [2020/04/16 14:26] – created aorthigdiscover-software [2020/04/16 14:35] aorth
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 $ sudo chown -R root:root /export/apps/igdiscover/0.12.3 $ sudo chown -R root:root /export/apps/igdiscover/0.12.3
 </code> </code>
 +
 +Run the [[http://docs.igdiscover.se/en/stable/testing.html#test|test data]]:
 +
 +<code>$ module load igdiscover/0.12.3
 +$ cd /tmp
 +$ wget https://bitbucket.org/igdiscover/testdata/downloads/igdiscover-testdata-0.5.tar.gz
 +$ tar xvf igdiscover-testdata-0.5.tar.gz
 +$ igdiscover init --db igdiscover-testdata/database/ --reads igdiscover-testdata/reads.1.fastq.gz discovertest
 +$ cd discovertest && igdiscover run</code>
igdiscover-software.txt · Last modified: 2020/04/16 14:38 by aorth