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igblast-software [2020/04/16 10:47] aorthigblast-software [2020/04/16 13:43] (current) aorth
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 $ sudo mkdir -p /export/apps/igblast/1.10.0/data $ sudo mkdir -p /export/apps/igblast/1.10.0/data
 $ sudo cp -r ncbi-igblast-1.10.0/* /export/apps/igblast/1.10.0 $ sudo cp -r ncbi-igblast-1.10.0/* /export/apps/igblast/1.10.0
 +$ sudo mkdir /export/apps/igblast/1.10.0/data
 +$ sudo chown aorth /export/apps/igblast/1.10.0/data
 +$ cd /export/apps/igblast/1.10.0/data
 +$ wget -r -nH --cut-dirs=4 ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data
 +$ wget -r -nH --cut-dirs=4 ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/database
 +$ wget -r -nH --cut-dirs=4 ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/optional_file
 +$ sudo chown -R root:root /export/apps/igblast/1.10.0/data
 </code> </code>
- 
-Note: I did not install the databases as I am not sure we need them, as we are not using igblast directly right now. Otherwise, the [[https://ncbi.github.io/igblast/|documentation]] says we need them for versions less than 1.13.0. 
igblast-software.1587034074.txt.gz · Last modified: 2020/04/16 10:47 by aorth