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--- hyphy-software [2023/03/02 11:08] – created aorth
+++ hyphy-software [2023/03/02 11:14] (current) – aorth
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 ====== hyphy ======
+HyPhy (Hypothesis Testing using Phylogenies) is an open-source software package for the analysis of genetic sequences (in particular the inference of natural selection) using techniques in phylogenetics, molecular evolution, and machine learning.
 ===== Information =====
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 $ hyphy</code>
+**Note:** please make sure to specify the ''CPU=integer'' option to control the number of CPU threads used by hyphy (should match your SLURM allocation) or else it will use all CPUs on the system!
 ===== Installation ======