htslib-software
Differences
This shows you the differences between two versions of the page.
| Both sides previous revisionPrevious revision | Last revisionBoth sides next revision | ||
| htslib-software [2021/01/06 09:16] – aorth | htslib-software [2021/09/05 10:17] – aorth | ||
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| Line 4: | Line 4: | ||
| ===== Information ===== | ===== Information ===== | ||
| - | * Latest Version: 1.11 | + | * Latest Version: 1.13 |
| * Added: March, 2015 | * Added: March, 2015 | ||
| - | * Updated: | + | * Updated: |
| * Link: https:// | * Link: https:// | ||
| Line 15: | Line 15: | ||
| Load one version into your environment and run some common commands: | Load one version into your environment and run some common commands: | ||
| - | < | + | < |
| $ tabix | $ tabix | ||
| $ bgzip</ | $ bgzip</ | ||
| Line 22: | Line 22: | ||
| Notes from the sysadmin during installation: | Notes from the sysadmin during installation: | ||
| - | < | + | < |
| - | $ wget https:// | + | $ wget https:// |
| - | $ tar xf htslib-1.11.tar.bz2 | + | $ tar xf htslib-1.13.tar.bz2 |
| - | $ cd htslib-1.11 | + | $ cd htslib-1.13 |
| - | $ ./configure --enable-plugins --enable-libcurl --prefix=/ | + | # install a newer compiler from Red Hat software collections |
| + | $ sudo yum install devtoolset-7-gcc devtoolset-7-gcc-gfortran devtoolset-7-libquadmath-devel devtoolset-7-gcc-c++ | ||
| + | $ scl enable devtoolset-7 bash | ||
| + | $ ./configure --enable-plugins --enable-libcurl --prefix=/ | ||
| $ make | $ make | ||
| - | $ sudo mkdir -p / | + | $ sudo mkdir -p / |
| - | $ sudo chown aorth / | + | $ sudo chown aorth / |
| $ make install | $ make install | ||
| - | $ sudo chown -R root:root / | + | $ sudo chown -R root:root / |
htslib-software.txt · Last modified: 2022/06/23 09:29 by aorth