genvar
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**GenVar** | **GenVar** | ||
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The pipeline, based on the program GeneWise, is designed to analyze an annotated genome and automatically identify missed gene calls and sequence variants such as genes with disrupted reading frames (split genes) and those with insertions and deletions (indels). For a given genome to be analyzed, GenVar relies on a database containing closely related genomes (such as other species or strains) as well as a few additional reference genomes. GenVar also helps identify gene disruptions probably caused by sequencing errors. We exemplify GenVar' | The pipeline, based on the program GeneWise, is designed to analyze an annotated genome and automatically identify missed gene calls and sequence variants such as genes with disrupted reading frames (split genes) and those with insertions and deletions (indels). For a given genome to be analyzed, GenVar relies on a database containing closely related genomes (such as other species or strains) as well as a few additional reference genomes. GenVar also helps identify gene disruptions probably caused by sequencing errors. We exemplify GenVar' | ||
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+ | **Installation: | ||
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+ | Get the right version from http:// | ||
+ | < | ||
+ | Extract the content into the desired directory | ||
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+ | Create a symbolic link to the /usr/bin directory | ||
+ | < | ||
+ | </ | ||
+ | for all the nodes: | ||
+ | < | ||
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genvar.txt · Last modified: 2010/05/22 14:19 by 127.0.0.1