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gatk-software [2018/10/15 13:25] aorthgatk-software [2021/09/06 11:36] aorth
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 ===== Information ===== ===== Information =====
  
-  * Latest Version: 4.0.10.1+  * Latest Version: 4.2.2.0
   * Added: May, 2014   * Added: May, 2014
-  * Updated: October2018 +  * Updated: September2021 
-  * Link: https://software.broadinstitute.org/gatk/+  * Link: https://github.com/broadinstitute/gatk
  
 ===== Usage ===== ===== Usage =====
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 Load one version into your environment and run it: Load one version into your environment and run it:
-<code>$ module load gatk/4.0.10.1+<code>$ module load gatk/4.2.2.0
 $ gatk</code> $ gatk</code>
  
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 <code>$ cd /tmp <code>$ cd /tmp
-$ wget https://github.com/broadinstitute/gatk/releases/download/4.0.10.1/gatk-4.0.10.1.zip +$ wget https://github.com/broadinstitute/gatk/releases/download/4.2.2.0/gatk-4.2.2.0.zip 
-$ unzip gatk-4.0.10.1.zip +$ unzip gatk-4.2.2.0.zip 
-$ sudo cp -r gatk-4.0.10./export/apps/gatk/4.0.10.1</code>+$ sudo cp -r gatk-4.2.2./export/apps/gatk/4.2.2.0</code>
gatk-software.txt · Last modified: 2023/05/11 09:59 by aorth