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gaas
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gaas [2010/02/09 12:51] 172.26.15.184 |
gaas [2010/05/22 14:19] |
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| - | ====GAAS==== | ||
| - | ---- | ||
| - | GAAS (Genome relative Abundance and Average Size) is a bioinformatic tool to calculate accurate community composition and average genome size in metagenomes by using BLAST, advanced parsing of hits and correction of genome length bias. | ||
| - | http:// | ||
| - | |||
| - | Install in: < | ||
| - | |||
| - | Modified it to work with Paracel blast. | ||
| - | Make changes in: Makefile.PL | ||
| - | |||
| - | < | ||
| - | # External GAAS dependency: NCBI BLAST | ||
| - | requires_external_bin 'pb blastall'; | ||
| - | requires_external_bin 'pb formatdb'; | ||
| - | </ | ||
| - | |||
| - | and / | ||
gaas.txt · Last modified: 2010/05/22 14:19 (external edit)
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