fraggenescan-software
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fraggenescan-software [2020/03/15 09:03] – aorth | fraggenescan-software [2020/03/15 09:17] (current) – aorth | ||
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* Added: July, 2015 | * Added: July, 2015 | ||
* Updated: March, 2020 | * Updated: March, 2020 | ||
- | * Link: http:// | + | * Link: https:// |
===== Usage ===== | ===== Usage ===== | ||
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< | < | ||
- | ./run_FragGeneScan.pl -genome=[seq_file_name] -out=[output_file_name] -complete=[1 or 0] -train=[train_file_name] -thread=[num_thread]</ | + | $ run_FragGeneScan.pl -genome=[seq_file_name] -out=[output_file_name] -complete=[1 or 0] -train=[train_file_name] -thread=[num_thread]</ |
**Note:** Please remember to specify the same number of CPU threads as you have requested in your SBATCH job parameters. | **Note:** Please remember to specify the same number of CPU threads as you have requested in your SBATCH job parameters. | ||
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$ make fgs | $ make fgs | ||
$ sudo mkdir -p / | $ sudo mkdir -p / | ||
- | $ find . -perm /u+x -print -exec chmod 755 ' | + | $ chmod 644 example/* train/* *.h *.c |
$ sudo cp -r . / | $ sudo cp -r . / | ||
</ | </ | ||
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fraggenescan-software.1584263032.txt.gz · Last modified: 2020/03/15 09:03 by aorth