Differences

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--- flye-software [2019/04/10 20:38] – aorth
+++ flye-software [2025/05/14 06:49] (current) – aorth
@@ Line 4: / Line 4: @@
 ===== Information =====
-  * Version: 2.4.2
+  * Version: 2.9.6
   * Added: April, 2019
-  * Link: https://github.com/fenderglass/Flye
+  * Updated: May, 2025
+  * Link: https://github.com/mikolmogorov/Flye
 ===== Usage =====
-See which versions of flye are available:
+See which versions are available:
 <code>$ module avail flye</code>
 Load one version into your environment and run it:
-<code>$ module load flye/2.4.2
+<code>$ module load flye/2.9.6
 $ flye</code>
@@ Line 24: / Line 25: @@
 <code>$ cd /tmp
-$ wget https://github.com/fenderglass/Flye/archive/2.4.2.tar.gz
+$ git clone https://github.com/mikolmogorov/Flye.git -b 2.9.6
-$ tar xf 2.4.2.tar.gz
+$ cd Flye
-$ cd Flye-2.4.2
+$ module load python/3.10
-$ mkdir -p /export/apps/flye/2.4.2
+$ sudo mkdir -p /export/apps/flye/2.9.6
-$ chown aorth /export/apps/flye/2.4.2
+$ sudo chown aorth /export/apps/flye/2.9.6
-$ python2 -m virtualenv /export/apps/flye/2.4.2
+$ python3 setup.py install --prefix=/export/apps/flye/2.9.6
-$ source /export/apps/flye/2.4.2/bin/activate
+$ sudo chown -R root:root /export/apps/flye/2.9.6</code>
-$ python setup.py build
-$ python setup.py install
+Note: I tried to install this using a python3 virtual environment but it gave me strange errors. As flye doesn't actually need any third-party Python packages I installed it in its own prefix without a venv.
-$ sudo chown -R root:root /export/apps/flye/2.4.2</code>