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flye-software [2019/04/10 20:36] – created aorthflye-software [2025/05/14 06:49] (current) aorth
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 ===== Information ===== ===== Information =====
  
-  * Version: 2.4.2+  * Version: 2.9.6
   * Added: April, 2019   * Added: April, 2019
-  * Link: https://github.com/fenderglass/Flye+  * Updated: May, 2025 
 +  * Link: https://github.com/mikolmogorov/Flye
  
 ===== Usage ===== ===== Usage =====
  
-See which versions of flye are available:+See which versions are available:
 <code>$ module avail flye</code> <code>$ module avail flye</code>
  
 Load one version into your environment and run it: Load one version into your environment and run it:
-<code>$ module load flye/2.4.2+<code>$ module load flye/2.9.6
 $ flye</code> $ flye</code>
  
-Note: you can control the number of CPU threads used by flye with the ''--threads'' option. See [[the documentation|https://github.com/fenderglass/Flye/blob/flye/docs/USAGE.md]] for more information.+Note: you can control the number of CPU threads used by flye with the ''--threads'' option. See [[https://github.com/fenderglass/Flye/blob/flye/docs/USAGE.md|the documentation]] for more information.
  
 ===== Installation ====== ===== Installation ======
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 <code>$ cd /tmp <code>$ cd /tmp
-wget https://github.com/fenderglass/Flye/archive/2.4.2.tar.gz +git clone https://github.com/mikolmogorov/Flye.git -b 2.9.6 
-tar xf 2.4.2.tar.gz +cd Flye 
-cd Flye-2.4.2 +module load python/3.10 
-$ mkdir -p /export/apps/flye/2.4.2 +sudo mkdir -p /export/apps/flye/2.9.6 
-$ chown aorth /export/apps/flye/2.4.2 +sudo chown aorth /export/apps/flye/2.9.6 
-python2 -m virtualenv /export/apps/flye/2.4.+python3 setup.py install --prefix=/export/apps/flye/2.9.6 
-$ source /export/apps/flye/2.4.2/bin/activate +$ sudo chown -R root:root /export/apps/flye/2.9.6</code> 
-$ python setup.py build + 
-$ python setup.py install +Note: I tried to install this using a python3 virtual environment but it gave me strange errors. As flye doesn't actually need any third-party Python packages I installed it in its own prefix without a venv.
-$ sudo chown -R root:root /export/apps/flye/2.4.2</code>+
flye-software.1554928606.txt.gz · Last modified: by aorth