http://hpc.ilri.cgiar.org/ Sun, 26 Apr 2026 19:21:25 +0000 FeedCreator 1.8 http://hpc.ilri.cgiar.org/_media/wiki/dokuwiki.svg http://hpc.ilri.cgiar.org/ http://hpc.ilri.cgiar.org/software/genome_assembly/cufflinks/1.0.3?rev=1339490827&do=diff cufflinks 1.0.3 installation Depends on samtools and boost! Make sure those are installed first... Unpack tar zxf cufflinks-1.0.3.tar.gz cd cufflinks-1.0.3 Configure, compile and install ./configure --prefix=/export/apps/cufflinks/1.0.3 --with-boost=/export/apps/boost/1.47.0 --with-bam=/export/apps/samtools/0.1.17 make sudo make install anonymous@undisclosed.example.com (Anonymous) Tue, 12 Jun 2012 08:47:07 +0000 http://hpc.ilri.cgiar.org/software/genome_assembly/cufflinks/2.0.0?rev=1339575552&do=diff cufflinks 2.0.0 installation Depends on samtools and boost! Make sure those are installed first... Unpack tar zxf cufflinks-2.0.0.tar.gz cd cufflinks-2.0.0 Install Eigen headers As of 2.0.0, cufflinks depends on Eigen as a compile-time dependency. Download and unzip the Eigen headers somewhere the compiler can find them: anonymous@undisclosed.example.com (Anonymous) Wed, 13 Jun 2012 08:19:12 +0000