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fasttree-software [2020/08/09 12:50] – aorthfasttree-software [2020/08/09 12:52] (current) – aorth
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 Load one version into your environment and run it: Load one version into your environment and run it:
 <code>$ module load fasttree/2.1.11 <code>$ module load fasttree/2.1.11
-$ FastTree+$ FastTree</code> 
 + 
 +*Note:* if you're using the multi-threaded ''FastTreeMP'' please specify the number of CPU threads to use with the ''OMP_NUM_THREADS'' environment variable: 
 + 
 +<code>$ export OMP_NUM_THREADS=3
 $ FastTreeMP</code> $ FastTreeMP</code>
 +
 +The number of CPU threads you choose should match the number of CPUs requested in your SLURM SBATCH allocation.
  
 ===== Installation ====== ===== Installation ======
fasttree-software.txt · Last modified: 2020/08/09 12:52 by aorth