ea-utils-software
Differences
This shows you the differences between two versions of the page.
Both sides previous revisionPrevious revision | |||
ea-utils-software [2015/10/08 12:51] – joguya | ea-utils-software [2018/11/18 09:14] (current) – aorth | ||
---|---|---|---|
Line 1: | Line 1: | ||
====== ea-utils ====== | ====== ea-utils ====== | ||
- | FASTQ processing | + | Command-line tools for processing |
===== Information ===== | ===== Information ===== | ||
- | * Version: 1.1.2 | + | * Version: 1.04.807 |
* Added: October, 2015 | * Added: October, 2015 | ||
- | * Link: https://code.google.com/p/ea-utils/ | + | |
+ | | ||
===== Usage ===== | ===== Usage ===== | ||
- | See versions of ea-utils which are available: | + | See available |
< | < | ||
- | Load ea-utils: | + | Load one version into your environment: |
- | < | + | < |
- | </ | + | |
===== Installation ====== | ===== Installation ====== | ||
Notes from the sysadmin during installation: | Notes from the sysadmin during installation: | ||
- | < | + | < |
- | $ wget "https://drive.google.com/uc? | + | $ wget https://github.com/ExpressionAnalysis/ |
- | $ tar -xvf ea-utils.1.1.2-806.tar.gz | + | $ sudo yum install gsl-devel perl-Test-Base |
- | $ cd ea-utils.1.1.2-806 | + | $ tar xf 1.04.807.tar.gz |
- | $ scl enable devtoolset-2 bash | + | $ cd ea-utils-1.04.807/clipper |
- | $ module load samtools/ | + | $ make |
- | $ sudo mkdir -p / | + | $ sudo mkdir -p / |
- | $ sudo chown -R joguya: | + | $ sudo chown aorth / |
- | $ module load perl/ | + | $ make install |
- | $ PREFIX=/ | + | $ sudo yum remove gsl-devel perl-Test-Base |
- | $ sudo chown -R root:root / | + | $ sudo chown -R root:root / |
- | </ | + |
ea-utils-software.1444308705.txt.gz · Last modified: 2015/10/08 12:51 by joguya