diy
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diy [2009/11/10 06:35] – 172.26.0.166 | diy [2009/11/10 07:45] – 172.26.0.166 | ||
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DIYA is intended to bring a collection of tools and libraries into the hands of small scale genomics labs for the process of sequence assembly and annotation. Projects include DIYA, MGAP, CRISPR, and DIYGV | DIYA is intended to bring a collection of tools and libraries into the hands of small scale genomics labs for the process of sequence assembly and annotation. Projects include DIYA, MGAP, CRISPR, and DIYGV | ||
- | http:// | ||
http:// | http:// | ||
- | INSTALLATION | + | |
+ | **INSTALLATION** | ||
---- | ---- | ||
Get the latest versiont from | Get the latest versiont from | ||
+ | http:// | ||
Required Perl modules (available from CPAN) | Required Perl modules (available from CPAN) | ||
* BioPerl (instructions at http:// | * BioPerl (instructions at http:// | ||
- | * Data:: | + | * Data:: |
* Getopt:: | * Getopt:: | ||
* FileHandle | * FileHandle | ||
Line 47: | Line 48: | ||
Quick Install | Quick Install | ||
- | 1. Install all the required Perl modules and any suggested software | + | 1. Install all the required Perl modules and any suggested software and databases |
- | and databases | + | |
2. Type the following at a command line | 2. Type the following at a command line | ||
+ | < | ||
+ | cd diya-X.X.X | ||
+ | perl Makefile.PL | ||
+ | make | ||
+ | make test | ||
+ | sudo make install | ||
+ | </ | ||
+ | 3. Set the $DIYAHOME variable to / | ||
+ | < | ||
+ |
diy.txt · Last modified: 2010/05/22 14:19 by 127.0.0.1