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diamond-software [2022/03/14 15:01] – aorthdiamond-software [2026/07/14 06:11] (current) – external edit 127.0.0.1
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 <code>$ wget ftp://ftp.ncbi.nlm.nih.gov/blast/db/FASTA/nr.gz <code>$ wget ftp://ftp.ncbi.nlm.nih.gov/blast/db/FASTA/nr.gz
-$ diamond makedb --in nr.gz -d nr+$ wget ftp://ftp.ncbi.nlm.nih.gov/pub/taxonomy/accession2taxid/prot.accession2taxid.FULL.gz 
 +$ wget ftp://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdmp.zip 
 +$ unzip taxdmp.zip 
 +$ diamond makedb --in nr.gz --db nr --taxonmap prot.accession2taxid.FULL.gz --taxonnodes nodes.dmp --taxonnames names.dmp
 $ sudo mkdir -p /export/data/bio/diamond $ sudo mkdir -p /export/data/bio/diamond
 $ sudo cp nr.dmnd /export/data/bio/diamond</code> $ sudo cp nr.dmnd /export/data/bio/diamond</code>
diamond-software.1647270066.txt.gz · Last modified: (external edit)