Differences

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--- cnvnator-software [2017/05/16 18:40] – created aorth
+++ cnvnator-software [2017/05/25 16:13] (current) – aorth
@@ Line 10: / Line 10: @@
 ===== Usage =====
-See versions of cnvnator which are available:
+See versions of CNVnator which are available:
 <code>$ module avail root</code>
 Load and run root:
-<code>$ module load cnvnator/0.3.3
+<code>$ module load CNVnator/0.3.3
 $ cnvnator</code>
@@ Line 32: / Line 32: @@
 $ sudo cp cnvnator /export/apps/CNVnator/0.3.3</code>
-Note: compiled on CentOS 7 because it needs root, which in turn needs quite a bit of modern dependencies.
+Note: compiled on CentOS 7 because it needs root, which in turn needs quite a bit of modern dependencies. Recommend running from compute03. Also, I compiled with max contig size of 30000, see src/HisMaker.cpp.