circos-software
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circos-software [2020/09/18 09:59] – aorth | circos-software [2022/11/28 08:10] (current) – aorth | ||
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* Version: 0.69-9 | * Version: 0.69-9 | ||
* Added: July, 2014 | * Added: July, 2014 | ||
- | * Updated: | + | * Updated: |
* Link: http:// | * Link: http:// | ||
===== Usage ===== | ===== Usage ===== | ||
- | See versions | + | See versions which are available: |
< | < | ||
Line 26: | Line 26: | ||
$ cd circos-0.69-9</ | $ cd circos-0.69-9</ | ||
- | Circos needs some Perl modules, check which we satisfy already with our Perl 5.28.2 package: | + | Circos needs some Perl modules, check which we satisfy already with our system |
- | < | + | < |
- | $ cd bin | + | |
- | $ ./circos -modules</ | + | |
- | Create directory for Perl modules and install missing modules with cpanm: | + | Create |
- | < | + | < |
- | $ sudo mkdir -p / | + | |
$ sudo chown -R aorth / | $ sudo chown -R aorth / | ||
- | $ cpanm -l / | + | $ cpanm -l / |
- | $ sudo yum install gd-devel | + | |
- | $ cpanm -l / | + | |
- | $ sudo yum remove gd-devel | + | |
- | $ cpanm -l / | + | |
- | $ cpanm -l / | + | |
- | </ | + | |
Test again: | Test again: | ||
- | < | + | < |
When all module requirements are satisfied continue the installation: | When all module requirements are satisfied continue the installation: | ||
- | < | + | < |
$ cp -r * / | $ cp -r * / | ||
circos-software.1600423180.txt.gz · Last modified: 2020/09/18 09:59 by aorth