Differences

This shows you the differences between two versions of the page.

--- chewbbaca-software [2023/09/07 09:42] – created aorth
+++ chewbbaca-software [2023/09/28 09:59] (current) – aorth
@@ Line 4: / Line 4: @@
 ===== Information =====
-  * Version: 3.2.0
+  * Version: git-87102063 (this roughly corresponds to version 3.3.0)
   * Added: September, 2023
   * Link: https://github.com/B-UMMI/chewBBACA
@@ Line 14: / Line 14: @@
 Load one version into your environment and run it:
-<code>$ module load chewbbaca/3.2.0
+<code>$ module load chewbbaca/git-87102063
 $ chewie</code>
@@ Line 21: / Line 21: @@
 Notes from the sysadmin during installation.
-<code>$ sudo mkdir -p /export/apps/chewbbaca/3.2.0
+<code>$ git clone https://github.com/B-UMMI/chewBBACA.git
-$ sudo chown aorth /export/apps/chewbbaca/3.2.0
+$ sudo mkdir -p /export/apps/chewbbaca/git-87102063
+$ sudo chown aorth /export/apps/chewbbaca/git-87102063
 $ module load python/3.9
-$ python3 -m venv /export/apps/chewbbaca/3.2.0/.venv
+$ python3 -m venv /export/apps/chewbbaca/git-87102063/.venv
-$ source /export/apps/chewbbaca/3.2.0/.venv/bin/activate
+$ source /export/apps/chewbbaca/git-87102063/.venv/bin/activate
 $ pip install --upgrade pip setuptools wheel
-$ pip install chewbbaca==3.2.0
+$ python3 setup.py install
-$ sudo chown -R root:root /export/apps/chewbbaca/3.2.0</code>
+$ sudo chown -R root:root /export/apps/chewbbaca/git-87102063</code>
 See the [[https://github.com/bioconda/bioconda-recipes/blob/master/recipes/chewbbaca/meta.yaml|bioconda meta.yaml for chewbbaca]] for more information.