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chado [2010/01/14 09:17] 172.26.15.184chado [2010/05/22 14:19] (current) – external edit 127.0.0.1
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 Convert file to gff using script: Convert file to gff using script:
-<code>genbank2gff3.pl</code>+<code> bp_genbank2gff3.pl NC_001142.gbk</code>
  
 Create pgsql database. Create pgsql database.
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 Load gff3 data into database Load gff3 data into database
-<code>gmod_bulk_load_gff3.pl  --dbname tparvadb --dbxref GeneID --organism T.parva --gff T.parva_chr1.gb.gff</code>+<code>gmod_bulk_load_gff3.pl  --dbname tparvadb --dbxref GeneID --organism T.parva --gff T.parva_chr1.gbk.gff</code>
  
 Install Gbrowse2 Install Gbrowse2
chado.1263460668.txt.gz · Last modified: 2010/05/22 14:19 (external edit)