User Tools

Site Tools


centrifuge-software

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Next revision
Previous revision
centrifuge-software [2022/02/22 14:36] – created aorthcentrifuge-software [2022/07/13 18:23] (current) aorth
Line 28: Line 28:
 $ tar xf v1.0.4.tar.gz $ tar xf v1.0.4.tar.gz
 $ cd centrifuge-1.0.4 $ cd centrifuge-1.0.4
-$ scl enable devtoolset-7 bash 
 $ make $ make
 $ sudo mkdir -p /export/apps/centrifuge/1.0.4 $ sudo mkdir -p /export/apps/centrifuge/1.0.4
Line 34: Line 33:
 $ make install prefix=/export/apps/centrifuge/1.0.4 $ make install prefix=/export/apps/centrifuge/1.0.4
 $ sudo chown -R root:root /export/apps/centrifuge/1.0.4</code> $ sudo chown -R root:root /export/apps/centrifuge/1.0.4</code>
 +
 +Install extra databases:
 +
 +<code>$ wget https://zenodo.org/record/3732127/files/h+p+v+c.tar.gz?download=1 -O h+p+v+c.tar.gz
 +$ tar xf h+p+v+c.tar.gz
 +$ sudo cp -v hpvc.* /export/apps/centrifuge/1.0.4/share/centrifuge/indices</code>
centrifuge-software.1645540575.txt.gz · Last modified: 2022/02/22 14:36 by aorth