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cd-hit-software [2018/11/16 14:46] – aorthcd-hit-software [2021/03/17 13:19] (current) – aorth
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 ===== Information ===== ===== Information =====
  
-  * Version: 4.6.8+  * Version: 4.8.1
   * Added: August, 2016   * Added: August, 2016
-  * Updated: November, 2018 +  * Updated: March, 2021 
-  * Link: http://weizhongli-lab.org/cd-hit/+  * Link: https://github.com/weizhongli/cdhit
  
 ===== Usage ===== ===== Usage =====
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 Load one version into your environment and run it: Load one version into your environment and run it:
-<code>$ module load cd-hit/4.6.8</code>+<code>$ module load cd-hit/4.8.1 
 +$ cd-hit</code>
  
 ===== Installation ====== ===== Installation ======
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 <code>$ cd /tmp <code>$ cd /tmp
-$ wget https://github.com/weizhongli/cdhit/archive/V4.6.8.tar.gz +$ wget https://github.com/weizhongli/cdhit/releases/download/V4.8.1/cd-hit-v4.8.1-2019-0228.tar.gz 
-$ cd cdhit-4.6.8+$ tar xf cd-hit-v4.8.1-2019-0228.tar.gz  
 +$ cd cd-hit-v4.8.1-2019-0228
 $ make $ make
-$ sudo mkdir -p /export/apps/cd-hit/4.6.8 +$ sudo mkdir -p /export/apps/cd-hit/4.8.1 
-$ sudo chown aorth /export/apps/cd-hit/4.6.8 +$ sudo chown aorth /export/apps/cd-hit/4.8.1 
-$ PREFIX=/export/apps/cd-hit/4.6.8 make install +$ PREFIX=/export/apps/cd-hit/4.8.1 make install 
-$ sudo chown root /export/apps/cd-hit/4.6.8/*</code>+$ sudo chown -R root:root /export/apps/cd-hit/4.8.1</code>
cd-hit-software.1542379591.txt.gz · Last modified: by aorth