ILRI Research Computing

User Tools

Site Tools

You are here: start » busco-software
busco-software

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
busco-software [2021/12/28 11:37] – aorthbusco-software [2023/03/21 12:37] (current) – aorth
Line 42: Line 42:
 $ pip install pandas biopython $ pip install pandas biopython
 $ python setup.py install $ python setup.py install
 +$ sudo cp scripts/generate_plot.py /export/apps/BUSCO/5.2.2/bin
 $ module load R/4.0 $ module load R/4.0
 $ mkdir /export/apps/BUSCO/5.2.2/r-libs $ mkdir /export/apps/BUSCO/5.2.2/r-libs
 $ R_LIBS=/export/apps/BUSCO/5.2.2/r-libs Rscript -e 'install.packages("ggplot2", repos="https://cran.rstudio.com")' $ R_LIBS=/export/apps/BUSCO/5.2.2/r-libs Rscript -e 'install.packages("ggplot2", repos="https://cran.rstudio.com")'
 $ sudo chown -R root:root /export/apps/BUSCO/5.2.2</code> $ sudo chown -R root:root /export/apps/BUSCO/5.2.2</code>
busco-software.1640691470.txt.gz · Last modified: by aorth