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bowtie2-software [2017/12/25 21:35] aorthbowtie2-software [2022/11/21 08:15] aorth
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 ===== Information ===== ===== Information =====
  
-  * Version: 2.3.3+  * Version: 2.5.0
   * Added: March, 2015   * Added: March, 2015
-  * Updated: September2017 +  * Updated: November2022 
-  * Link: http://bowtie-bio.sourceforge.net/bowtie2/index.shtml+  * Link: https://bowtie-bio.sourceforge.net/bowtie2/index.shtml
  
 ===== Usage ===== ===== Usage =====
  
-See versions of bowtie2 which are available:+See versions which are available:
 <code>$ module avail bowtie2</code> <code>$ module avail bowtie2</code>
  
-Load and run bowtie2+Load one version into your environment and run it
-<code>$ module load bowtie2/2.3.3+<code>$ module load bowtie2/2.5.0
 $ bowtie2</code> $ bowtie2</code>
  
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 <code>$ cd /tmp <code>$ cd /tmp
-$ wget 'https://downloads.sourceforge.net/project/bowtie-bio/bowtie2/2.3.3/bowtie2-2.3.3-linux-x86_64.zip?r=https%3A%2F%2Fsourceforge.net%2Fprojects%2Fbowtie-bio%2Ffiles%2Fbowtie2%2F2.3.3&ts=1505896186&use_mirror=netix' -O bowtie2-2.3.3-linux-x86_64.zip +$ wget https://liquidtelecom.dl.sourceforge.net/project/bowtie-bio/bowtie2/2.5.0/bowtie2-2.5.0-linux-x86_64.zip 
-$ unzip bowtie2-2.3.3-linux-x86_64.zip +$ unzip bowtie2-2.5.0-linux-x86_64.zip 
-sudo mkdir /export/apps/bowtie2/2.3.3 +$ sudo cp -bowtie2-2.5.0-linux-x86_64/* /export/apps/bowtie2/2.5.0</code>
-sudo cp -rv bowtie2-2.3.3/* /export/apps/bowtie2/2.3.3</code> +
bowtie2-software.txt · Last modified: 2022/11/21 08:16 by aorth