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bowtie2-software [2015/03/24 07:39] – created joguyabowtie2-software [2022/11/21 08:15] aorth
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 ===== Information ===== ===== Information =====
  
-  * Version: 2.2.3 +  * Version: 2.5.0 
-  * Added: October2014 +  * Added: March2015 
-  * Link: http://bowtie-bio.sourceforge.net/bowtie2/index.shtml+  * Updated: November, 2022 
 +  * Link: https://bowtie-bio.sourceforge.net/bowtie2/index.shtml
  
 ===== Usage ===== ===== Usage =====
  
-=== See versions of bowtie2 which are available ===+See versions which are available:
 <code>$ module avail bowtie2</code> <code>$ module avail bowtie2</code>
  
-=== Load and run bowtie2 === +Load one version into your environment and run it: 
-<code>$ module load bowtie2/2.2.3+<code>$ module load bowtie2/2.5.0
 $ bowtie2</code> $ bowtie2</code>
- 
  
 ===== Installation ====== ===== Installation ======
 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code>wget "http://downloads.sourceforge.net/project/bowtie-bio/bowtie2/2.2.3/bowtie2-2.2.3-linux-x86_64.zip?r=http%3A%2F%2Fsourceforge.net%2Fprojects%2Fbowtie-bio%2Ffiles%2Fbowtie2%2F2.2.3%2F&ts=1413528357&use_mirror=tenet" -O bowtie2-2.2.3-linux-x86_64.zip +<code>$ cd /tmp 
-unzip bowtie2-2.2.3-linux-x86_64.zip +wget https://liquidtelecom.dl.sourceforge.net/project/bowtie-bio/bowtie2/2.5.0/bowtie2-2.5.0-linux-x86_64.zip 
-sudo mkdir /export/apps/bowtie2/2.2.3/ +unzip bowtie2-2.5.0-linux-x86_64.zip 
-sudo cp -rv bowtie2-2.2.3/* /export/apps/bowtie2/2.2.3/</code> +sudo cp -bowtie2-2.5.0-linux-x86_64/* /export/apps/bowtie2/2.5.0</code>
bowtie2-software.txt · Last modified: 2022/11/21 08:16 by aorth