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blast-software

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blast-software [2018/02/27 12:11] – aorthblast-software [2023/10/03 08:13] – aorth
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 ===== Information ===== ===== Information =====
  
-  * Version: 2.7.1++  * Version: 2.14.1+
   * Added: February, 2015   * Added: February, 2015
-  * Updated: February, 2018 +  * Updated: October, 2023 
-  * Link: http://blast.ncbi.nlm.nih.gov/Blast.cgi+  * Link: https://blast.ncbi.nlm.nih.gov/Blast.cgi
  
 ===== Usage ===== ===== Usage =====
  
-See versions of blast which are available:+See versions which are available:
 <code>$ module avail blast</code> <code>$ module avail blast</code>
 +
 +Load one version into your environment and run it:
 +
 +<code>$ module load blast/2.14.1+
 +$ blastn -h</code>
  
 ===== Installation ====== ===== Installation ======
 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code>$ lftp ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST +<code>$ cd /tmp 
-> dir +$ wget https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ncbi-blast-2.14.1+-x64-linux.tar.gz 
-> get ncbi-blast-2.7.1+-x64-linux.tar.gz +$ tar xf ncbi-blast-2.14.1+-x64-linux.tar.gz 
-> quit +$ sudo cp -r ncbi-blast-2.14.1+ /export/apps/blast/2.14.1+</code>
-$ tar xf ncbi-blast-2.7.1+-x64-linux.tar.gz +
-$ sudo cp -r ncbi-blast-2.7.1+ /export/apps/blast/2.7.1+</code>+
blast-software.txt · Last modified: 2023/11/24 08:58 by aorth