biological-databases
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biological-databases [2019/03/13 20:11] – aorth | biological-databases [2019/03/13 20:15] – aorth | ||
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We endeavor to keep this list updated as the One True List™. | We endeavor to keep this list updated as the One True List™. | ||
- | ^Name ^Version Number | + | ^Name ^Comments |
- | | NCBI nr/nt nucleotide collection | N/A | 2018-11-24 | ''/ | + | | NCBI nr/nt nucleotide collection | | 2018-11-24 | ''/ |
- | | NCBI nr/nt protein collection | N/A | 2018-08-16 | ''/ | + | | NCBI nr/nt protein collection | | 2018-08-16 | ''/ |
- | | UniProt' | + | | UniProt' |
- | | UniProt' | + | | UniProt' |
- | | UniProt' | + | | UniProt' |
+ | ==== Using These Databases ==== | ||
To use these databases you generally need to set an environment variable pointing to the location of the database before running your program. For example, to use '' | To use these databases you generally need to set an environment variable pointing to the location of the database before running your program. For example, to use '' | ||
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</ | </ | ||
- | < | + | ==== Notes ==== |
- | <hr /> | + | |
- | </ | + | |
¹ Use the following to determine the date of a BLAST database: ''/ | ¹ Use the following to determine the date of a BLAST database: ''/ |
biological-databases.txt · Last modified: 2023/10/09 11:18 by aorth