biological-databases
Differences
This shows you the differences between two versions of the page.
Both sides previous revisionPrevious revisionNext revision | Previous revisionNext revisionBoth sides next revision | ||
biological-databases [2019/03/12 10:14] – jean-baka | biological-databases [2019/03/13 19:42] – aorth | ||
---|---|---|---|
Line 1: | Line 1: | ||
- | ====== Biological | + | ====== Biological |
- | Some of the most common biological sequence databases are available on the HPC, for you to use with tools like BLAST, etc. Below you can find the list of them, their source URL and the last time they were updated, with links to the update scripts that our system administrator use to perform updates. | + | Some of the most common biological sequence databases are available on the HPC for you to use with tools like BLAST. Below you can find the list of them, their location on the system, |
We endeavor to keep this list updated as the One True List™. | We endeavor to keep this list updated as the One True List™. | ||
- | + | ^Name ^Version number | |
- | ^Name ^Version number | + | |NCBI nr/nt nucleotide collection|N/ |
- | |NCBI nr/nt nucleotide collection|N/ | + | |NCBI nr/nt protein collection|N/ |
- | |NCBI nr/nt protein collection|N/ | + | |UniProt' |
- | |UniProt' | + | |
|UniProt' | |UniProt' | ||
|UniProt' | |UniProt' | ||
+ | |||
+ | ¹ Use the following to determine the date of a BLAST database: ''/ |
biological-databases.txt · Last modified: 2023/10/09 11:18 by aorth